Gene Sked_17990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17990 
Symbol 
ID8633435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2005133 
End bp2006395 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content70% 
IMG OID 
Productcarbamoyl-phosphate synthase small subunit 
Protein accessionYP_003314560 
Protein GI269795105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTACGC AGCTCCACGC GACCAAGACC CCCGAGACGG ACGTCTCCGA CGCCGCGCTC 
CTCGTCCTGG AGGACGGTCG CACCTTCTCC GGTCGTGCCT ACGGCGCGCA CGGCACCACG
GTCGGCGAGA TCGTCTTCAA CACCGGCATG ACCGGGTACC AGGAGACGCT GACCGACCCG
TCGTACCACC GGCAGATCGT CGTGATGACG GCGCCGCACA TCGGCAACAC GGGTGTGAAC
GACGACGACC CGGAGTCCGG CAAGATCTGG GTGAGCGGCT ACGTGGTGCG CGACCCTGCG
CGCCGTCCGT CGAACTGGCG TGCCGTGGGC ACCCTCGAGG ACGAGCTGGT CCGTCAGGGT
GTCGTGGGGA TCTCGGACAT CGACACCCGT GCGCTGACGC GTCACCTGCG CGAGCGCGGT
GTGATGCGCG GTGCGGTGTT CTCCGGCGAC GCGCTGCTGG TCGGCGGGTA CCCGCGGTCG
ATCGACGACC TCGTCGCGGA GGTCCTCGCG GCCCCGTCGA TGAAGGGCGC CGACCTGGCC
GGCGAGGTGA GCACCGACGA GGCGTACGTG ATCGAGCCCC TCGGCGAGTT CGCCGGGAAG
GCCCCGCTGA AGACCGTGGT CGCGATCGAC CTGGGCATCA AGGCGATGAC TCCGCAGCGC
CTGGCCGAGC GAGGCATCCG CGTGCACGTG CTGCCGTCGT CCTCGACCAT CGACGACATC
GCGGCGCTCT CGCCCGACGG CGTGTTCTTC TCCAACGGCC CCGGCGACCC GGGTGCGGCG
ACGCACGAGG TCGAGCTGCT CCGCGAGGTG CTCGACCGTG GTCTGCCGTA CTTCGGCATC
TGCTTCGGCA ACCAGATCCT CGGGCGTGCG CTGGGCTTCG GCACGTACAA GCTGGCCTAC
GGCCACCGTG GGATCAACCA GCCGGTGATG GACCTCGCGA CCCGCAAGGT CGAGATCACC
TCGCAGAACC ACGGCTTCGC GGTCGACGCC CCGATCGACG CCGAGACCGT CGCCCCGCAC
GCAGACCGCT ACGGGCGTGT GATCGTGTCG CACGTCGGGC TCAACGACCA GGTGGTCGAG
GGTCTCGAGT GCCTCGACAT CCCGGCCTTC TCCGTGCAGT ACCACCCGGA GGCAGCCGCA
GGCCCGCACG ACGCCTCGTA CCTCTTCGAC CGCTTCCTCG ACCTCATGAC GTCCGGCGCG
TCGTCCGCCG CAGGCCTGTC GGCCGCGGGG CCCCAGACCG CCACGTCGCA GAAGGAGAAC
TGA
 
Protein sequence
MTTQLHATKT PETDVSDAAL LVLEDGRTFS GRAYGAHGTT VGEIVFNTGM TGYQETLTDP 
SYHRQIVVMT APHIGNTGVN DDDPESGKIW VSGYVVRDPA RRPSNWRAVG TLEDELVRQG
VVGISDIDTR ALTRHLRERG VMRGAVFSGD ALLVGGYPRS IDDLVAEVLA APSMKGADLA
GEVSTDEAYV IEPLGEFAGK APLKTVVAID LGIKAMTPQR LAERGIRVHV LPSSSTIDDI
AALSPDGVFF SNGPGDPGAA THEVELLREV LDRGLPYFGI CFGNQILGRA LGFGTYKLAY
GHRGINQPVM DLATRKVEIT SQNHGFAVDA PIDAETVAPH ADRYGRVIVS HVGLNDQVVE
GLECLDIPAF SVQYHPEAAA GPHDASYLFD RFLDLMTSGA SSAAGLSAAG PQTATSQKEN