Gene Sked_17980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17980 
Symbol 
ID8633434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp2004570 
End bp2005136 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003314559 
Protein GI269795104 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTGC CCCTCCCGGT CGCCGTGGCG ATCATGCTGT CGGTCGGTGC CCTGCTGCTG 
GTCATCATGT GGCGCGGGTG GCGGTCGCTC CAGGCGCGCA GCGCGGCCAA GGTGTCGGCG
CTGGCGGCGG TGCCGGCCGA GGCGGACCTG GGTGCGGCGC GCTCGGAGCC GATCGAGGGC
ACGTACGTGA CGACGACGAC GGCGGGCGAC TGGCTCGACC GTGTCGCGGC GCGCGACCTC
GGGTACAAGG CCAAGGCCGT CGTGCAGGTG TTCGACGCGG GCGTGCTCGT GGCGCGCGCG
GGTGCCTCCG ACCTGTTCGT GCCGGTGGCC GACCTCACGG GTGCGTCTCG TACCTCGGGC
ATGGCCGGCA AGTACGTCGG CGGGGAGGGC ATCGTCGTGA TCGCCTGGTC CGCCGTGTCG
CCGTCGGGGG AGCGCACCGC TCTCGAGACG GGTGTGCGCA CCCTGCACAA GACCGACCGA
CCTCTCCTCC TCGACGCCGT GAGCGCTCTC GCGGCCTCGT CTTCCTCTTC CCCCGACTCT
CGTACCGACA TCAAGGAGTC CGAGTGA
 
Protein sequence
MNLPLPVAVA IMLSVGALLL VIMWRGWRSL QARSAAKVSA LAAVPAEADL GAARSEPIEG 
TYVTTTTAGD WLDRVAARDL GYKAKAVVQV FDAGVLVARA GASDLFVPVA DLTGASRTSG
MAGKYVGGEG IVVIAWSAVS PSGERTALET GVRTLHKTDR PLLLDAVSAL AASSSSSPDS
RTDIKESE