Gene Sked_17540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17540 
Symbol 
ID8633390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1953623 
End bp1954006 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content66% 
IMG OID 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_003314515 
Protein GI269795060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.162392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACGA TCTTCATCCT CCTGCTCGCC GCGGTCGCGA TGGTCTTCAT GACCCGCAGC 
TCGCGCAAGC GTCAGAAAGA GGCCATGTCC TTCCGGGACA ACCTGGCCGT CGGCCAGGAG
GTCATGACCG GCTCCGGCTA CTTCGGGACG ATCGTCGCCG TCGAGGACGA CGCGATCACG
CTCGAGACCA CCCCGGGCAA CACGTCGCGC TGGCTCCGTG CCGCGATCGC CAAGCTCGTG
GACCCGCCCG CTGACGCCAT CGTCGTCGAG GGCTCCTCGA TCGAGACGGC CGCTGCCGTC
GACGCCAAGG ACGAGCGCGC CTTCGACATC CCTGAGGACA TCTCGAGCCT CATCGACAAG
AAGTCCGACG AGAACGGCAA GTAG
 
Protein sequence
MTTIFILLLA AVAMVFMTRS SRKRQKEAMS FRDNLAVGQE VMTGSGYFGT IVAVEDDAIT 
LETTPGNTSR WLRAAIAKLV DPPADAIVVE GSSIETAAAV DAKDERAFDI PEDISSLIDK
KSDENGK