Gene Sked_17390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_17390 
Symbol 
ID8633375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1940572 
End bp1940925 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content71% 
IMG OID 
Productprotein of unknown function (DU1801) 
Protein accessionYP_003314500 
Protein GI269795045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0530083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGA CCCCCGTCAC CACGTACGTC GCCGGGCTCG CTCCACCGCT GCGCGAGGTC 
GCGGAGCGTC TCGTCGAGAT CCTCGACGCC GGCCTGGAGG GGCGTGACGG GGTCATGTGG
CACGGCCACC CCGTGTGGAT GGACGGCAAG ACCCCCGTCG CCGGCTTCAA GGCCTACAGC
GCGTACGTCA CGCTGATGCT CTGGCAGGGC CAGCGCATCG ACGACGCCAC CGGCAGGCTG
GCGGGGAGCG GCTCCGCGCA GATGGCCTCG ACCAAGATCG CGACCGTCGA CGACATCGGG
GAGGCGACCA TCTCGGGCTG GCTCCAGGCC GTCGACGACC TCCCTGCTGC GTGA
 
Protein sequence
MASTPVTTYV AGLAPPLREV AERLVEILDA GLEGRDGVMW HGHPVWMDGK TPVAGFKAYS 
AYVTLMLWQG QRIDDATGRL AGSGSAQMAS TKIATVDDIG EATISGWLQA VDDLPAA