| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_16600 |
|---|
| Symbol | |
|---|
| ID | 8633296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | - |
|---|
| Start bp | 1859786 |
|---|
| End bp | 1860655 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | pyrimidine reductase, riboflavin biosynthesis |
|---|
| Protein accession | YP_003314429 |
|---|
| Protein GI | 269794974 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.334901 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGCGG ACCACCCTGT GCTGGACGTC CAACCCGTGC CGGACGACCG CCCCGTGCTG
GACTTCCTGG TCGCCGACGG CGCACCGGTC GAGGAGGCCC GCACCATCGC CCCTGACCCC
GACGAGGCGA TGCTCAGCGT CCTCTACGCC CACCCGGCAC CCGAGCCGGG TCGCCGGACA
TGGGTCCGTG CCAACATGGT GACCACACTC GACGGTGCCG CGACCGGCGC AGACGGCGTC
TCGGGGGCGA TCAACGACGA CGCGGACTAC CGCGTCTTCC GGGTGCTGCG CGCTCTCGCC
GACGTCGTGC TCGTGGGTGC CGGGACCGTG CGCGCCGAGG GCTACACGCC GCTGTCGGTG
CCAGACGGGC TCTCCGACCT CCGCGCTGCT GCTGGCCGCG CACCGGCGAT CGAGCTCGCC
ATCGTCTCGC GATCTGGCGA CCTCCCTGGG CAGATCACCG ATCTCGACCA GCACCCCGCC
GGGACCGTCC CCCCGATCGT CCTCACGACG ACGTCAGGCG CCGCGAACCT GCGCGGCTAC
CCGGCCGACC GGGTGGTCGT CACCGGCGAC ACCGACGTCG ACCTCACCGT CGCGCTCGAC
GCGCTCGCCG ACCGTGGTCT GGTGCGGGTG CTGGCCGAGG GCGGTCCGTC GCTGCTGGGT
GACCTGGTCG ACGGCCAGCA CCTCGACGAG CTCTGCCTGA CCACGAGCCC GCTGGTGGTC
GGCGGCCCCG CGCCGCGCAT CGTCCGCACG GGCGACTACC TGCAGCGCGA GGGTCGCCCG
CCCGCCCGCC TGGTGCACCT GCTGCACTCC GGCGGCGTGC TGCTGGCCCG CTGGCACCTG
GGCCGCGCAG GGCTCCCAGA CCACACCTAG
|
|---|
| Protein sequence | MLADHPVLDV QPVPDDRPVL DFLVADGAPV EEARTIAPDP DEAMLSVLYA HPAPEPGRRT
WVRANMVTTL DGAATGADGV SGAINDDADY RVFRVLRALA DVVLVGAGTV RAEGYTPLSV
PDGLSDLRAA AGRAPAIELA IVSRSGDLPG QITDLDQHPA GTVPPIVLTT TSGAANLRGY
PADRVVVTGD TDVDLTVALD ALADRGLVRV LAEGGPSLLG DLVDGQHLDE LCLTTSPLVV
GGPAPRIVRT GDYLQREGRP PARLVHLLHS GGVLLARWHL GRAGLPDHT
|
|---|
| |