Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_16250 |
Symbol | |
ID | 8633261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1820605 |
End bp | 1823361 |
Gene Length | 2757 bp |
Protein Length | 918 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | aconitase |
Protein accession | YP_003314394 |
Protein GI | 269794939 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00478324 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAGCG TGGACACGTT CGGGTCGAAG GGAACTCTCG AGGTCGATGG CACCTCGTAC GAGATCTTCC GGCTCGCCGC AGTACAGGGG ACGGACAAGC TTCCGTTCAG CCTCAAGGTT CTCGCCGAGA ACCTCCTCCG CACCGAAGAC GGCGCGAACA TCACCGCTGA CCACGTCAAC GCCCTGGCCT CCTGGGACCC CGACGCTCAG CCGGACACCG AGATCCAGTT CACCCCTGCG CGCGTCATCA TGCAGGACTT CACCGGTGTG CCCTGCGTCG TCGACCTCGC CACCATGCGC GAGGCCGTCG CCGACCTCGG CGGAGACCCC GAGCGCGTGA ACCCGCTCGC CCCCGCCGAG CTGGTCATCG ACCACTCCGT GCAGATCGAC GTCGCCGGCC GCGCCGACGC CTTCGAGCGC AACGTCGAGC TCGAGTACGA GCGCAACCGT GAGCGCTACC AGTTCCTGCG CTGGGGCCAG ACGGCCTTCG ACGACTTCAA GGTCGTCCCC CCGGGCACCG GCATCGTGCA CCAGGTCAAC ATCGAGTTCC TGGCCCGCAC GATCATGACG CGCGAGGTGG ACGGCGTCCT CCGCGCCTAC CCCGACACCT GCGTCGGCAC CGACTCGCAC ACGACGATGG TCAACGGCCT CGGCGTGCTC GGCTGGGGCG TCGGCGGCAT CGAGGCCGAG GCCGCGATGC TCGGCCAGCC CGTGTCGATG CTCATCCCGC GCGTCGTCGG CTTCAAGCTC ACCGGTCAGA TCCCCTCGGG CGTCACCGCG ACCGACGTGG TCCTCACCAT CACGCAGCAG CTGCGCCAGC ACGGCGTCGT CGGCAAGTTC GTCGAGTTCT ACGGCGAGGG CGTCGCGGCG GTCCCGCTCG CCAACCGCGC GACCATCGGC AACATGAGCC CCGAGTTCGG CTCGACCGCG GCGATCTTCC CGATCGACGG CGTCACGCTC GACTACCTGC GCCTCACCGG CCGTTCCGAG GAGCAGCTCG CGCTCGTCGA GGCGTACGCC AAGGAGCAGG GCATGTGGCT CGACCCGTCG GCCCCGACGT ACGTGGAGCC GAAGTTCTCC GAGTACCTCG AGCTCGACCT CTCGACCGTC GTCCCCTCGA TCGCCGGCCC GAAGCGCCCC CAGGACCGCA TCGAGCTCTC GAACGCCAAG TCCGCCTTCG AGCGCGACCT GCCGACGTAC GCGCCCGAGG TCATCGACGC CGTCGACCAG GCGGAGAAGG AGTCCTTCCC CGCCTCCGAC GCCCCCGCCG TCGGCACCCA GGTCCGCCGC GTCGTCGACG TCACCGACAC CCAGGGCCGG TCCTTCGGGC TGTTCCACGG TGCGGTCGCG ATCGCGTCGA TCACCTCCTG CACCAACACG TCGAACCCGT CGGTCATGAT GGCCGCCGCG CTCGTCGCCA AGAAGGCCGT CGAGAAGGGC CTCACGGCCA AGCCGTGGGT CAAGACCTCC ATGGCCCCGG GCTCGCAGGT CGTCACGAAC TACTACGAGA AGGCCGGCAT GTGGCCTTAC CTCGAGAAGC TCGGCTTCCA CCTCGTCGGC TACGGCTGCG CCACCTGCAT CGGCAACTCC GGCCCGCTCG ACGAGAACAT CTCGACCGCG GTCAACGACC ACGACCTCGC CGTCGTCTCG GTGCTCTCGG GCAACCGCAA CTTCGAGGGT CGCATCAACC CCGACGTCAA GATGAACTAC CTCGCCTCGC CGCCGCTCGT CATCGCGTAC GCGCTCGCCG GGACCATGGA GTTCGACTTC GACCACGAGC CCCTCGGGCG CTCCGAGGAC GGCTCGCCGA TCTTCCTCAA GGACATCTGG CCCACGCCGG AAGAGGTCCA GGAGACCATC GACGCGTCGA TCGACCGTGC GATGTTCACC AAGGACTACG CCGACGTCTT CACCGGCGAC GAGCGCTGGC GCGCCCTGCC GACCCCGGTC GGCAACACCT TCGAGTGGGA CGCGGAGTCC ACCTACGTCC GCAAGCCCCC GTACTTCGAC GGCATGAGCC TCACGCCGTC GCCCGTCACG GACATCTCCG GTGCGCGCGT CCTCGCCAAG CTCGGCGACT CCGTCACCAC CGACCACATC AGCCCTGCTG GTGCGATCAA GCCGGGCACC CCGGCCGCGG AGTACCTCGC TGGCAACGGC GTCGAGCGTC GCGACTACAA CTCCTATGGC TCGCGCCGCG GGAACCACGA GGTGATGATC CGCGGGACCT TCGCGAACAT CCGCCTGCGC AACCAGCTCC TGGAGAACGT CGAGGGTGGC TACACCTTCA ACTTCGTCAC CAACGAGCAG TCGTTCATCT ACGACGCTGC GCAGGACTAC GCCGCACAGG GCACCCCTCT GGTGATCCTC GGTGGCAAGG AGTACGGCTC CGGCTCGTCC CGCGACTGGG CGGCCAAGGG CACCGCGCTC CTCGGCGTCA AGGCCGTCAT CACCGAGAGC TTCGAGCGTA TCCACCGCTC GAACCTCATC GGCATGGGAG TCCTCCCGCT GCAGTTCCCG GTCGGCGAGA ACGCCGAGTC CCTCGGGCTC GACGGCACCG AGACCTTCGA CATCTCCGGT GTCACGGTCC TCAACGACGG CTCGACCCCG TCGACCGTCA AGGTCGCGGC GACGAAGACC GACGGCACGT CCGTCGAGTT CGACGCCGTC GTGCGCATCG ACACCCCGGG CGAGGCGGAC TACTACCGCA ACGGCGGGAT CCTCCAGTAC GTGCTCCGGT CGCTCGTCCA GAAGTGA
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Protein sequence | MSSVDTFGSK GTLEVDGTSY EIFRLAAVQG TDKLPFSLKV LAENLLRTED GANITADHVN ALASWDPDAQ PDTEIQFTPA RVIMQDFTGV PCVVDLATMR EAVADLGGDP ERVNPLAPAE LVIDHSVQID VAGRADAFER NVELEYERNR ERYQFLRWGQ TAFDDFKVVP PGTGIVHQVN IEFLARTIMT REVDGVLRAY PDTCVGTDSH TTMVNGLGVL GWGVGGIEAE AAMLGQPVSM LIPRVVGFKL TGQIPSGVTA TDVVLTITQQ LRQHGVVGKF VEFYGEGVAA VPLANRATIG NMSPEFGSTA AIFPIDGVTL DYLRLTGRSE EQLALVEAYA KEQGMWLDPS APTYVEPKFS EYLELDLSTV VPSIAGPKRP QDRIELSNAK SAFERDLPTY APEVIDAVDQ AEKESFPASD APAVGTQVRR VVDVTDTQGR SFGLFHGAVA IASITSCTNT SNPSVMMAAA LVAKKAVEKG LTAKPWVKTS MAPGSQVVTN YYEKAGMWPY LEKLGFHLVG YGCATCIGNS GPLDENISTA VNDHDLAVVS VLSGNRNFEG RINPDVKMNY LASPPLVIAY ALAGTMEFDF DHEPLGRSED GSPIFLKDIW PTPEEVQETI DASIDRAMFT KDYADVFTGD ERWRALPTPV GNTFEWDAES TYVRKPPYFD GMSLTPSPVT DISGARVLAK LGDSVTTDHI SPAGAIKPGT PAAEYLAGNG VERRDYNSYG SRRGNHEVMI RGTFANIRLR NQLLENVEGG YTFNFVTNEQ SFIYDAAQDY AAQGTPLVIL GGKEYGSGSS RDWAAKGTAL LGVKAVITES FERIHRSNLI GMGVLPLQFP VGENAESLGL DGTETFDISG VTVLNDGSTP STVKVAATKT DGTSVEFDAV VRIDTPGEAD YYRNGGILQY VLRSLVQK
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