Gene Sked_14000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_14000 
Symbol 
ID8633036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1579140 
End bp1579826 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content74% 
IMG OID 
ProductPAP2 superfamily protein 
Protein accessionYP_003314174 
Protein GI269794719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCAG CAACCACGGC TGCCCGCGCC ACGCGTGCCG CGGTCCTCCT CGCCGCAGGT 
GCGCTCGTCA TGACCGTCGC CTGGCTGCTG CGCAGACCCA GCCACGACCT CGTCCAGACC
ATCGTGCCCA CCACCGTCGA CCTCCCCGGG GTGGCCGCCG TCTCCGAGGT CGCCGTGGTG
CTCCTCGGCC TGGCCTGCGC GGTCGCCGGG TGGCAGGCCC TGCGGCGCGG GGGAGCGAAC
CTCGCGCTCG CGGTCGCCGC CGGTGCGGGG GTCGTGGCCG CGTACGGCGC GAGCGAGGGC
CTCAAGGCGT TCGTGCAGGC CGATCGCGTG TGCCGGGACA TCGCCGTGGT CGACTGCCCG
GGTGAGGGCA GCTGGGGGTT CCCGAGCAAC CACACGACCA TCGCCGTCGC GGGGGCGACC
GCGGTGGTGC TCCTGGTGCG CTCCACGTGG CCCCGGTGGG CTCAGGCGTC CGTCGTGGTC
CTCGCGGTGC TCGGAGGTGT CGGGAGGGTG CTGCAGGGCG TCCACGCGCC CCACGAGGTG
GTGGCAGGTG TTGCGCTGGG CAGCGTGACG CTGCTGGTGG TCGTCCTGCT GCTCGGTCCC
GTGCTGGCGT CGCCGCGTGT GGTCGAGCGG CTCGACGCGG TCAGTAGCCC TCTGCGCTCT
CGATCACGTG CCGCAGCTCA CCGATGA
 
Protein sequence
MLSATTAARA TRAAVLLAAG ALVMTVAWLL RRPSHDLVQT IVPTTVDLPG VAAVSEVAVV 
LLGLACAVAG WQALRRGGAN LALAVAAGAG VVAAYGASEG LKAFVQADRV CRDIAVVDCP
GEGSWGFPSN HTTIAVAGAT AVVLLVRSTW PRWAQASVVV LAVLGGVGRV LQGVHAPHEV
VAGVALGSVT LLVVVLLLGP VLASPRVVER LDAVSSPLRS RSRAAAHR