| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_13050 |
|---|
| Symbol | |
|---|
| ID | 8632941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1465164 |
|---|
| End bp | 1465943 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | VTC domain-containing protein |
|---|
| Protein accession | YP_003314080 |
|---|
| Protein GI | 269794625 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCG TCGTCGACGC GCAGGTCGAT CCGTTGCTCG CCGGCTTCGC CCCGGTGTCT
CTCACCGAGA TCCAGGAGCT CGCCGACCTG CAGACCCGCG TCGACCGCAA GTACGTGGTC
CCCGTACGGG TCTTCGCGGA GCTGCTCGCC GACCAGGAAG GCCTGCGGGT CCTCGAGATC
GACGGTCGCC GCCGCTTCCG GTACGAGTCC GTCTACTTCG ACACCCCGTC GCTCGAGGCG
TACCGCAGCG CTGCGCACGG CCGACGCCGC CGTTTCAAGG TCCGCACCCG CACCTACGCG
GACTCCGGCG AGTGCGTCTT CGAGGTCAAG GTCAAGGGCG GTCGCGGCGA GACGGTCAAG
GAGCGCCTCG CCTACGAGCG GTCGTCCGCG GCGGCCCTCG ACTCGCAGGC CCGCGCCTTC
GCGGAGGCCG TCCTCGTCCA GGCGCGACCT GACGCGCAGA GCGTCGTAGA GGTCCTCGAG
CCGACCCTCC TCACCACCTA CGACCGCACG ACCTTCGTCG ACCCCGTCGC CGGGACGCGG
CTCACCTGCG ACTCGTCGTT GCTGTGCACC CCGGTGGGGA CGCAGGGGAG CGCCAGCCTC
GGCGACCAGG TGGTCCTCGA GAGCAAGTCG CCCGGTACCG CCACGGCGGT CGACCGGTGG
CTGTGGGCCC GCGGCCACCG CCCGGTGAGC CTCAGCAAGT ACTGCGTGGG GCTGGCCGCC
CTCGACGACG CGCTGCCCTC CAACCGGTGG AGCCGCACGC TGCGACGGCA CGTGGTCTGA
|
|---|
| Protein sequence | MSAVVDAQVD PLLAGFAPVS LTEIQELADL QTRVDRKYVV PVRVFAELLA DQEGLRVLEI
DGRRRFRYES VYFDTPSLEA YRSAAHGRRR RFKVRTRTYA DSGECVFEVK VKGGRGETVK
ERLAYERSSA AALDSQARAF AEAVLVQARP DAQSVVEVLE PTLLTTYDRT TFVDPVAGTR
LTCDSSLLCT PVGTQGSASL GDQVVLESKS PGTATAVDRW LWARGHRPVS LSKYCVGLAA
LDDALPSNRW SRTLRRHVV
|
|---|
| |