Gene Sked_12550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_12550 
Symbol 
ID8632891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1424501 
End bp1425160 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content69% 
IMG OID 
Productchloramphenicol O-acetyltransferase 
Protein accessionYP_003314031 
Protein GI269794576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.837307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC CCTCTGCGAC CCCGATCGAC CTCTCGACCT GGCCGAGGCG ACAGCACTTC 
GAGCACTACC GCTCGGCCGT CCCGTGCACC TACGCGCTCA CCGTCGATCT GGACGCCACA
GCATTCGTGG AGGCCCTCCG CGACTCCACC CGGAAGACCT ACATCGCGCA AATCTGGGCC
CTGGCGACAG CCGTGAACCA GCATGACGAG TTCCGCATGT GCCTCACGCC CGACGGCGCC
CCGGCCACCT GGCCCGTGGT CCACCCGTCG TTCACGGTCT TCAACGCGGC TCGGGAGACC
TTCGCGAGCG TGTGGGCTCC CTACGACCCG AGCTTTGCCG CGTTCCACGA CACGGCGGCG
GCCCTGCTGA CCGAGCACCG CACGGCGACC GAGATGTTCC CGCAGGGCCC ACCGCCGGCG
AACTCCTTCG ACGTCTCGAG TCTCCCCTGG ACGTCTTTCA CCGGGTTCTC GCTCGCGGTC
CAGCCAGGGT TCGACCACCT GGCACCGATC TTCACGCTCG GTCGGTACGT CGAGCGGGAG
GGCTCTCTCC GCCTGCCCGT CGCACTGCAG GTGCACCACG CCGCAGCGGA CGGCTTCCAC
GCAGCACGGC TCCTCGAGAC CGTCCAAGGG CTGCTCCTCG AGCCCGGGTG GGTGGCCTGA
 
Protein sequence
MTSPSATPID LSTWPRRQHF EHYRSAVPCT YALTVDLDAT AFVEALRDST RKTYIAQIWA 
LATAVNQHDE FRMCLTPDGA PATWPVVHPS FTVFNAARET FASVWAPYDP SFAAFHDTAA
ALLTEHRTAT EMFPQGPPPA NSFDVSSLPW TSFTGFSLAV QPGFDHLAPI FTLGRYVERE
GSLRLPVALQ VHHAAADGFH AARLLETVQG LLLEPGWVA