| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_11140 |
|---|
| Symbol | |
|---|
| ID | 8632750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 1292394 |
|---|
| End bp | 1293404 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_003313892 |
|---|
| Protein GI | 269794437 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCG CAGTCCTCGG CTCGGGTGCC TGGGGCACCA CCTTCGCGCA GGTCCTCGCC
GACGCCGGCT GCACCGTGCG GCTGTGGGGG CGCAACCAGG ACGTGGCCCT CCAGATCACG
ACGGAGCACG TCAACGGCCG CTACCTCCCG GGGATCGAGC TGCCCGAGTC GGTGACCGCC
ACGACCGACG TGGCCGCAGC CCTCGACGGC GTCGACCTCG TGGTCGTGGC CATCCCGTCG
CAGAGCGCCC GCGCGACCCT CGAGCCGCTG CGCGACCTCG TGCCCGCCGG CGCCGTGGCC
GTCTCCCTCA TGAAGGGCGT CGAGCTGAGC ACCGACCGCC GCATGAGCGA GGTGGTCGCC
GAGTCGCTCG CGATCGACGC CGGTCGCGTG GCCGTCGTCT CGGGGCCGAA CCTCGCCGGC
GAGATCGCCC GTCGCCAGCC GACCGCCACG GTCGTCTCGT CGAGCGACCC GCAGACGGCC
GCGCTCGTCG CGAGGGCGTG CTCCTCCGGG TACTTCCGCC CGTACACGAA CGCCGACGTG
GTCGGCGTCG AGCTGTGCGG CGCCGTGAAG AACGTCATCG CCCTCGCCGT GGGCATGGCC
CAGGGGCGCG GCTTCGGCTA CAACACGACG GCCACGGTCA TCACCCGCGG TCTGGCGGAG
ATCAGCCGGC TCGGGCTCGC GCTCGGCGCC GACGCCGAGA CCTTCCCCGG GCTTGCCGGG
ATGGGCGACC TCATGGCCAC CTGCGCGTCA CCGTCCTCGC GCAACCACAC GCTCGGCAAG
CACGTGGGCC AGGGCATGAC GCTCGAGGAC GCGATCACCG CCACGGGCGG GACGGCCGAG
GGCGTGAAGT CCTGCCGCTC GGTCCTCGAG CTCGCCCGTT CCGTCGGCGT CGAGATGCCC
ATCACCGAGG CCGTGGTCGG CGTGCTGCAC GGCGGCCTGC CGGTCGACGA CATCGCCCGC
GGGCTCCTCG CCCGCCCGCA GCGCTCAGAG GGCGTCCGCG GGGACGCCTG A
|
|---|
| Protein sequence | MIAAVLGSGA WGTTFAQVLA DAGCTVRLWG RNQDVALQIT TEHVNGRYLP GIELPESVTA
TTDVAAALDG VDLVVVAIPS QSARATLEPL RDLVPAGAVA VSLMKGVELS TDRRMSEVVA
ESLAIDAGRV AVVSGPNLAG EIARRQPTAT VVSSSDPQTA ALVARACSSG YFRPYTNADV
VGVELCGAVK NVIALAVGMA QGRGFGYNTT ATVITRGLAE ISRLGLALGA DAETFPGLAG
MGDLMATCAS PSSRNHTLGK HVGQGMTLED AITATGGTAE GVKSCRSVLE LARSVGVEMP
ITEAVVGVLH GGLPVDDIAR GLLARPQRSE GVRGDA
|
|---|
| |