Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_11110 |
Symbol | |
ID | 8632747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1289385 |
End bp | 1290023 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | 3-isopropylmalate dehydratase, small subunit |
Protein accession | YP_003313889 |
Protein GI | 269794434 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAGT TCGCAACGCA CACCGGTGTG GGCGTCCCGC TGCGCCGCAG CAACGTCGAC ACCGACCAGA TCATCCCCGC CGTCTACCTC AAGCGCGTGA CCCGCACGGG CTTCGAGGAC GCGCTCTTCG CCGCCTGGCG CGGCGACGAG TCCTTCGTGC TCAACCAGCC CGCGTACACG AGCGGGTCCG TGCTCGTGGC CGGGCCGGAC TTCGGCACCG GGTCCTCCCG CGAGCACGCG GTGTGGGCGC TCAAGGACTA CGGCTTCAAG GCGGTCCTCT CCGCCCGCTT CGCCGACATC TTCCGCGGCA ACTCCGGCAA GCAGGGCCTG CTCGCCGCCC AGCTCGCCCA GGAGGACATC GAGCTGCTGT GGAAGGTCCT CGAGACCAAG CCGGGCACCG AGGTCACCGT GAACCTCGTC GACCGCACGG CCTCCGCGGA CGACGTCGTC GTGCCCTTCC AGGTGGACGA CTACACCCGC TGGCGCCTCA TGGAGGGCCT CGACGACATC GGCCTGACCC TCCAGCACGA GGCCGAGATC ACCGAGTTCG AGGAGTCGCG CGCCGCGTGG CGCCCGAAGA CGCTCCCGGC CAAGCACCTC CCGCCCGTCG AGATCGAGGC GGCGCGCCCC GTCTCCTGA
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Protein sequence | MEKFATHTGV GVPLRRSNVD TDQIIPAVYL KRVTRTGFED ALFAAWRGDE SFVLNQPAYT SGSVLVAGPD FGTGSSREHA VWALKDYGFK AVLSARFADI FRGNSGKQGL LAAQLAQEDI ELLWKVLETK PGTEVTVNLV DRTASADDVV VPFQVDDYTR WRLMEGLDDI GLTLQHEAEI TEFEESRAAW RPKTLPAKHL PPVEIEAARP VS
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