Gene Sked_11110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_11110 
Symbol 
ID8632747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1289385 
End bp1290023 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content70% 
IMG OID 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_003313889 
Protein GI269794434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAGT TCGCAACGCA CACCGGTGTG GGCGTCCCGC TGCGCCGCAG CAACGTCGAC 
ACCGACCAGA TCATCCCCGC CGTCTACCTC AAGCGCGTGA CCCGCACGGG CTTCGAGGAC
GCGCTCTTCG CCGCCTGGCG CGGCGACGAG TCCTTCGTGC TCAACCAGCC CGCGTACACG
AGCGGGTCCG TGCTCGTGGC CGGGCCGGAC TTCGGCACCG GGTCCTCCCG CGAGCACGCG
GTGTGGGCGC TCAAGGACTA CGGCTTCAAG GCGGTCCTCT CCGCCCGCTT CGCCGACATC
TTCCGCGGCA ACTCCGGCAA GCAGGGCCTG CTCGCCGCCC AGCTCGCCCA GGAGGACATC
GAGCTGCTGT GGAAGGTCCT CGAGACCAAG CCGGGCACCG AGGTCACCGT GAACCTCGTC
GACCGCACGG CCTCCGCGGA CGACGTCGTC GTGCCCTTCC AGGTGGACGA CTACACCCGC
TGGCGCCTCA TGGAGGGCCT CGACGACATC GGCCTGACCC TCCAGCACGA GGCCGAGATC
ACCGAGTTCG AGGAGTCGCG CGCCGCGTGG CGCCCGAAGA CGCTCCCGGC CAAGCACCTC
CCGCCCGTCG AGATCGAGGC GGCGCGCCCC GTCTCCTGA
 
Protein sequence
MEKFATHTGV GVPLRRSNVD TDQIIPAVYL KRVTRTGFED ALFAAWRGDE SFVLNQPAYT 
SGSVLVAGPD FGTGSSREHA VWALKDYGFK AVLSARFADI FRGNSGKQGL LAAQLAQEDI
ELLWKVLETK PGTEVTVNLV DRTASADDVV VPFQVDDYTR WRLMEGLDDI GLTLQHEAEI
TEFEESRAAW RPKTLPAKHL PPVEIEAARP VS