Gene Sked_10000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_10000 
Symbol 
ID8632636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1154871 
End bp1155686 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content72% 
IMG OID 
ProductATP synthase, F1 delta subunit 
Protein accessionYP_003313783 
Protein GI269794328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.179635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGGA CCAGCCAGGC GTCTCTCGAC GCCGCACAGC TCCGGCTCGC GCCGGTGCTC 
GCGGCTGCGG GGGAGCAGGC CTACACCATC GGTGACCAGC TGTTCGCCGT GGTCGACGCA
CTCGACGCCT CCGGGGCGCT GCGCCGGTCT CTCGCAGACC CGTCACGTCC CGCAGCGGAC
AAGGCGGGCC TCGTGCGCAA CCTCCTGTCG AGCGCGTTCG ACCAGCACAC GGTCGACGCG
GTCGCCGACC TCGTGACCTC GCGGTGGTCG CACGAGGGTG ACCTCGTCGA CGCCGTCGAC
ATCCTGGGGA TCGACGCGTA CCTGGCCTCG GCCGAGGCAC GTGGCGACCT CGCGAAGGTC
GAGCACGAGC TGTTCCAGAT CACCCGCACG CTGGTCGGTC AGCGCGAGGT GCGCCAGGCG
CTCTCGGACA GCAGCACCGA CCCGGCACGC CGCGTGAAGC TGGTCGACGA CATCCTCGTC
GGCAAGGCGG ACCCGGTGAC GGTCGCGATC TGCCGCCGGG CGACCGCGAA GCCTCGCGGC
GAGCGGTTCG TCCCGGCCCT GGGCCGTGTC GGCGAGATCG CCGCGAAGCG CCGTTCCCGC
AAGGTCGCCT CGGTGACCTC CGGCTCCGAG CTGAGCGCCA CCCAGCAGGA CAGGCTCGCA
GCACTGCTCG AGCAGGCCTA CGGGTCGGCC GTCCAGCTCA ACGTGACCGT CGACCCGACG
GTCGTCGGCG GGCTGCGCAT CCAGATCGGC TCGGACGTCG TCGACTCGAC GGTCCTCAGC
CGGCTCGCAG CCGCCCGACG GCAGCTGGCC TCTTGA
 
Protein sequence
MRGTSQASLD AAQLRLAPVL AAAGEQAYTI GDQLFAVVDA LDASGALRRS LADPSRPAAD 
KAGLVRNLLS SAFDQHTVDA VADLVTSRWS HEGDLVDAVD ILGIDAYLAS AEARGDLAKV
EHELFQITRT LVGQREVRQA LSDSSTDPAR RVKLVDDILV GKADPVTVAI CRRATAKPRG
ERFVPALGRV GEIAAKRRSR KVASVTSGSE LSATQQDRLA ALLEQAYGSA VQLNVTVDPT
VVGGLRIQIG SDVVDSTVLS RLAAARRQLA S