Gene Sked_09950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_09950 
Symbol 
ID8632631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1151320 
End bp1152447 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content69% 
IMG OID 
ProductUDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
Protein accessionYP_003313778 
Protein GI269794323 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGTCT ACCTGCTGGT CATGCTCGTC GCGGCGGCCG TGACCTACCT CGCCACCCCC 
TTCGCGCGCT GGCTGGCCGT CAAGACCAAC GCCGTCACCG CGGTGCGCTC GCGCGACGTC
CACACCATCC CGACCCCCCG GCTCGGCGGC GTGGCGATGT ACCTCGGCCT CGCCGCGGCT
TTCCTCTTCG CCTCGCGGAT GGGGTTCCTC GAGGGGGTCT TCGAGGTCAA CAACAACGCG
TGGGTGATCC TCGCCGCAGG CGGGATGGTC TGCCTGCTGG GGGTCGCCGA CGACATCTGG
GACCTCGACT GGATGACCAA GCTCGTCGGC CAGGTGCTGG CGGCCGGGCT CATGGCCTGG
CAGGGCGTCC AGCTCATCAC GGTGCCCATC GGAGGGTTGA CGATCGGGTC GAGCCGGCTG
TCGCTGTTCG TCACCGTGAT CTCGGTGGTG ATCGCGATGA ACGCGGTGAA CTTCGTCGAC
GGCCTCGACG GCCTCGCCGC GGGCATGATC GCCATCGGTG GTGCGGCGTT CTTCGTCTAC
ACCTACCTGC TCACGCTCGA GGCGAACCCC ACGGACTACT CCAACCTCGC GACCCTCATC
GTCTCGGCGC TGGTGGGGGC GTGTCTGGGT TTCCTGCCGC ACAACTTCCA CCCGTCGAAG
ATCTTCATGG GCGACTCCGG CTCGATGCTC ATCGGCCTCA CGATGGCCGC CGCCGCGATC
GTGGTCACGG GCCAGATCGA CCCCGAGCAG GCGTCCGACG GCCAGCAGAT CCCGGCCTTC
ATCCCGATCC TGCTCCCGGC TGCGGTCCTC ATGCTGCCGC TGCTCGACAT GGGCCTCGCC
GTCGTGCGTC GCCTGCTCGC CGGGAAGTCG CCGTTCCACC CCGACCGCAT GCACCTGCAC
CACCGGCTGC TGCAGCTCGG CCACTCGCAC CCGCGGGCGG TCGTCATCAT GTACCTGTGG
AGCGCGGTCT TCTCCTTCGG TGCAGCAGCC CTCGTCGTCG TGCCCTGGCA GACCGTGCTC
GCCGGGCTCG GCGTCGCCGT CGTCGTCTCG ATCATCCTCA CGCTGGGCCC GCTGCGCGGG
CGCGAGCGTG GGGCCCGCCA CGCAGTCCCC GGAGGACAGT CCCGATGA
 
Protein sequence
MRVYLLVMLV AAAVTYLATP FARWLAVKTN AVTAVRSRDV HTIPTPRLGG VAMYLGLAAA 
FLFASRMGFL EGVFEVNNNA WVILAAGGMV CLLGVADDIW DLDWMTKLVG QVLAAGLMAW
QGVQLITVPI GGLTIGSSRL SLFVTVISVV IAMNAVNFVD GLDGLAAGMI AIGGAAFFVY
TYLLTLEANP TDYSNLATLI VSALVGACLG FLPHNFHPSK IFMGDSGSML IGLTMAAAAI
VVTGQIDPEQ ASDGQQIPAF IPILLPAAVL MLPLLDMGLA VVRRLLAGKS PFHPDRMHLH
HRLLQLGHSH PRAVVIMYLW SAVFSFGAAA LVVVPWQTVL AGLGVAVVVS IILTLGPLRG
RERGARHAVP GGQSR