Gene Sked_09620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_09620 
Symbol 
ID8632598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1111973 
End bp1114786 
Gene Length2814 bp 
Protein Length937 aa 
Translation table11 
GC content68% 
IMG OID 
Productalcohol dehydrogenase, class IV 
Protein accessionYP_003313746 
Protein GI269794291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.323412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTCA CCGACGCACC GACCACAGTC GCCGCAGAGA TCGACGCACT CGTGACCGCA 
GGCAACGCCG CGCTCGCCGA GTACGCGAGC TTCACGCAGG AGCAGATCGA CCACATCGTC
AAGAAGGCGT CGGTCGCTGC CCTCAACCAG CACGGCGAGC TCGCGGTGCA CGCCGTCCGC
GAGACCGGCC GCGGGGTGTT CGAGGACAAG GCCGTGAAGA ACATCTTCGC GTGCGAGCAC
GTCACCAACT CGATGCAGAA CCTCAAGACC GTCGGCATCA TCGGCCGCGA CGAGCTCACG
GGAATCACCG AGATCGCCGA GCCCGTCGGC GTGATCTGCG GCGTCACCCC GGTGACCAAC
CCGACCTCGA CGGCGATCTT CAAGTCGCTC ATCGCGCTCA AGACCCGCAA CCCGATCATC
TTCGGCTTCC ACCCCTCGGC CCAGCAGTCC TCGGTCGCCG CGGCCCGTGT CGTCCGTGAC
GCCGCCGTCG CGGCAGGCGC ACCGGCCGAC TGCATCCAGT GGGTCGAGCA CCCGTCGCTC
GAGGCCACCA ACCTCCTCAT GAACCACCCG GGCGTCGCGC TCATCCTCGC GACCGGTGGC
AACGCGATGG TCCGGGCCGC GTACTCCTGC GGCAAGCCCG CCCTCGGGGT CGGCGCCGGC
AACGTCCCCG CCTTCATCGA GCGCAGCGCC AAGCTCAAGC GCGCCGTCAA CGACGTGGTC
CTCTCGAAGG CCTTCGACAA CGGCATGATC TGCGCCTCCG AGCAGGCCGT CATCCTCGAC
GCCCCGATCT ACGACGAGGC CATGGCCGAG TTCGCGACCC TGCACGCCTA CACCGTGAAC
GCCGCCGAGA AGGCGATGCT CGAGGAGTTC ATCTTCGGCG TCCAGGCCGA CGGCACCAAC
TGCGGCGAGG CCAAGCTCAA CCCGACGGTC GTCGGCCAGA GCCCCGAGTG GATCGCCTCC
AAGGCGGGCT TCACGGTCCC CGAGGGCACG TCGATCATCC TCGCCGAGGT CTCCGAGGTC
GGGCCGTCCG AGCCCCTCAC CCGCGAGAAG CTCTGCCCCG TGCTCGCCGT GCTGCGCGCC
GACGGCGCCG AGGAGGGCAT CCGCCTCTCC GAGCAGATGG TGGAGTTCGA CGGCCTCGGC
CACTCGGGCT CGATCCACTC CGAGGACCAG GCGATCATCG AGGAGTTCGG CTCCCGCGTG
AAGGCCGTCC GCATCATCAC CAACGCGCCC AGCTCGCTCG GCGGCATCGG CGACATCTAC
AACGCCTTCA TCCCCTCGCT GACCCTCGGC TGCGGCTCCT ACGGCCACAA CTCGGTCTCC
AACAACGTGT CGGCCATCAA CCTCGTCAAC ATCAAGCGCA TCGGCCGGAG GAACAACAAC
TTGCAGTGGT TCAAGGTCCC CGCCAAGACG TACTTCGAGC CGAACGCCAT CCGCTACCTC
GCCGACATGC GGGGCATCAG CCGGGTCACC ATCGTCACCG ACTCGACCAT GACCCGCCTC
GGCTTCGTCG ACAAGATCCT CGACGTGCTC AACCGCCGCG GCGACCGCGT CGCCCTGCAG
ATCATCGACG ACATCCTCCC CGAGCCGACC GTCGACTCGG TCACCGCAGG TGCCGAGCTC
ATGCGGGCCT TCCACCCCGA CACGATCATC GCCCTCGGTG GCGGATCGCC CATGGACGCC
GCGAAGGTCA TGTGGCTCCT GTACGAGCAC CCCGAGATCG AGTTCGCGGA CATGAAGGAG
AAGTTCTTCG ACGTCCGCAA GCGCGCCTTC AAGTTCCCCG ACCTCGGCGA GAAGGCCAGC
CTCGTCTGCA TCCCGACCAC CTCGGGCACC GGCTCCGAGA TGACCCCCTT CGCGGTCATC
ACCGACCCGG TCACGGGCAA GAAGTACCCG CTCGCCGACT ACGCGCTCAC CCCGACCGTC
GCCATCGTCG ACCCCGCGCT GACCGCGATG ATGCCCGGCT TCCTCGCTGC CGACTCCGGC
TTCGACGCCC TGACCCACGC GACCGAGGCC TTCGTCTCCG TCTACGCGAA CGACTTCACC
GACGGCCTCT GCCTGCACGC CATCAAGCTG ATCTTCGAGA ACATCGAGGC CTCGGTCAAC
GGCGCACCGG GCAGCACCGA CCAGACGGTC GTCAAGGCCC GCGAGAAGAT GCACAACGCC
GCGACCATCG CCGGCATGGC CTTCGGCAAC GCGTTCCTCG GGATCGTGCA CGCGATGGCG
CACGTCACCG GGTCGGCCTT CCACCTCATC CACGGCCGCA CCAACGCGAC CTACCTGCCG
CACGTCATCC GCTACAACGG CACCGTGCCC ACGAAGCTCA CCAGCTGGCC CAAGTACGAG
CACTACGTCG CACCCGAGCG CTTCCAGGAG ATCGCCAAGC ACCTCGGGCT CCCGGCGTCG
ACCCCGGCCG AGGGTGTCGA GTCCTACGCC AAGGCCGTCG AGGCGCTCCG CGACAAGGTC
GGCATCGCCC CGTCCTTCCA GGCCCAGGGC GTGGCCGAGG AAGACTTCAT CGGGAGCCTG
GACATGCTCG CCATGGGTGC CTACGAGGAC CAGTGCGCAC CGGCCAACCC CCGCATGCCG
ATGCTCGAGG ACATGAAGAC CATCATGGAG GCCGCGTACT ACGGCACCTC CTTCGAGGCC
GTCCGGGCCA GCCGACGGGC CGCCGTCGAG CCGACCGTCC CGGCCGAGGC CACCGTCCCG
GCCGAGGCCC TCGTCAGCGT CCCCGCGGAG ACCACGCCGG GCACCACCCC GGACGACGCA
GCCGAGACCT CCGCGGAGCC CGCAGCGGCC CCGAAGAAGG GCCGCCGCCG CTAG
 
Protein sequence
MTLTDAPTTV AAEIDALVTA GNAALAEYAS FTQEQIDHIV KKASVAALNQ HGELAVHAVR 
ETGRGVFEDK AVKNIFACEH VTNSMQNLKT VGIIGRDELT GITEIAEPVG VICGVTPVTN
PTSTAIFKSL IALKTRNPII FGFHPSAQQS SVAAARVVRD AAVAAGAPAD CIQWVEHPSL
EATNLLMNHP GVALILATGG NAMVRAAYSC GKPALGVGAG NVPAFIERSA KLKRAVNDVV
LSKAFDNGMI CASEQAVILD APIYDEAMAE FATLHAYTVN AAEKAMLEEF IFGVQADGTN
CGEAKLNPTV VGQSPEWIAS KAGFTVPEGT SIILAEVSEV GPSEPLTREK LCPVLAVLRA
DGAEEGIRLS EQMVEFDGLG HSGSIHSEDQ AIIEEFGSRV KAVRIITNAP SSLGGIGDIY
NAFIPSLTLG CGSYGHNSVS NNVSAINLVN IKRIGRRNNN LQWFKVPAKT YFEPNAIRYL
ADMRGISRVT IVTDSTMTRL GFVDKILDVL NRRGDRVALQ IIDDILPEPT VDSVTAGAEL
MRAFHPDTII ALGGGSPMDA AKVMWLLYEH PEIEFADMKE KFFDVRKRAF KFPDLGEKAS
LVCIPTTSGT GSEMTPFAVI TDPVTGKKYP LADYALTPTV AIVDPALTAM MPGFLAADSG
FDALTHATEA FVSVYANDFT DGLCLHAIKL IFENIEASVN GAPGSTDQTV VKAREKMHNA
ATIAGMAFGN AFLGIVHAMA HVTGSAFHLI HGRTNATYLP HVIRYNGTVP TKLTSWPKYE
HYVAPERFQE IAKHLGLPAS TPAEGVESYA KAVEALRDKV GIAPSFQAQG VAEEDFIGSL
DMLAMGAYED QCAPANPRMP MLEDMKTIME AAYYGTSFEA VRASRRAAVE PTVPAEATVP
AEALVSVPAE TTPGTTPDDA AETSAEPAAA PKKGRRR