Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_09270 |
Symbol | |
ID | 8632563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 1067655 |
End bp | 1068644 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | uncharacterized membrane protein |
Protein accession | YP_003313711 |
Protein GI | 269794256 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.130747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGACCTCG ACGCCTTCTC CGACGTGCAC CGTGGCGAGT GGGACCGGCT CAAGACGCTG AGCACCCGGC GTCGCCTCGA CGGTGCCGAG GCGGACGAGC TCGTCCGCCT CTACCAGACC GTGGCCACGC ACCTGTCGAC GGTCCGGTCC TCCGCCCCGG ACCCCGTGCT GGTCTCCGAG CTGTCCCAGA CCCTCAACCG CGCCCGCACC TCCATCGCCG GTGCGCACGA GCCCGCCTGG CGCGACGTCG CACGCTTCGT GGTGCTCTCC CTCCCGGCAG CCTTCTACAG GCTGCGCTGG TGGATCTGGG GCGTCAGCGC GGCCTTCCTG CTGCTCGCCG TCGTCGCCGG GGTCTGGGTG GCGACGACCC CCGAGGGGCT CGCGGCCGTC GGCCCGCCGA GCTACCGCGA GGAGTACGTC CAGAACGCCT TCGCCGAGTA CTACGAGCCG GGCGCGGGCT TCGCCGCCGT GGTCTGGACC AACAACGCCT GGATCGCCGC GCAGTGCGTG GCCTTCGGCA TCACCGGGCT GTGGCCCGTC TACGTGCTCG TCCAGAACTT CGTCATGGTC GGTGCGATCG GCGGGATGAT GGCGCACTAC GGCGAGCTCG GCATGTTCCT GCAGCTCATC CTGCCGCACG GCCTGCTCGA GCTCACGTCG ATCCTCGTGG CGGGCGCGGC GGGACTCAAG CTCTTCTGGA CCCTCGTCGC GCCCGGCCAC CGTCCGCGCG GTCGTGCCGT GGCGGAGGAG GGGCGTGCTC TCTTCACCGT CGCCGCCGGC CTCGTCGCGA CTCTCGCCCT CTCCGGGCTC GTCGAGGGCT TCGTCACCGG ATCGTCCATG GTCTGGTGGC TCAAGATCGT CATCGGGGCG CTCGCCCTCG GGGCCTTCTG GACCTACGTC CTCGTGCTCG GACGTCGTGC CGTCGCACTG GGGGAGACCG GGGACCTCGA GGAGGAGAAC GTCGGGAGCG TCCAGCAGGT CGTCGGCTGA
|
Protein sequence | MDLDAFSDVH RGEWDRLKTL STRRRLDGAE ADELVRLYQT VATHLSTVRS SAPDPVLVSE LSQTLNRART SIAGAHEPAW RDVARFVVLS LPAAFYRLRW WIWGVSAAFL LLAVVAGVWV ATTPEGLAAV GPPSYREEYV QNAFAEYYEP GAGFAAVVWT NNAWIAAQCV AFGITGLWPV YVLVQNFVMV GAIGGMMAHY GELGMFLQLI LPHGLLELTS ILVAGAAGLK LFWTLVAPGH RPRGRAVAEE GRALFTVAAG LVATLALSGL VEGFVTGSSM VWWLKIVIGA LALGAFWTYV LVLGRRAVAL GETGDLEEEN VGSVQQVVG
|
| |