Gene Sked_08730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_08730 
Symbol 
ID8632509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp989725 
End bp990948 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content75% 
IMG OID 
Productglycosyltransferase 
Protein accessionYP_003313658 
Protein GI269794203 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.510164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.300811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGTCG CGAGCCGCAT CTTCGTCCCC GAGCCCGCCG CCGCGTCGTT CCGGCTCGCC 
GCCCTCGTCG CGGCGCTCAT CGGCCAGGGA GCCGACGTCG AGGTCCTCAC GGTCCGCCCG
GCCCCGCAGC ACGGCGGCCA GGACGGTGCC CCCCGGACGG ACGACGCCGA GACCGACGCG
CACATCCGCC GCTGGCCGGT GCTGCGTGAC GCGACCGGCA CCGTCCGCGG GTACGTGCCG
TACCTCAGCT TCGACATCCC GCTGTTCTTC CGGCTCCTGC TGTGCCGTCG CCCGGACGTG
GTGGTCGTCG AGCCGCCGCC CACCACGGCC TTCGTGGTGC GGGTGGTCTG CACCCTGCGC
CGCATCCCGT ACGTGAGCTA CGCGCCCGAC GTGTGGTCCG ACGCCGCGCG CGGGACCCCC
GCCCCGCGTG TGCTCGTCGA CGCCGTCGCC GCGGTCGAGT CCTGGGCGCT GCGTGGTGCA
CGCCGTGTGC TCGCCGTGTC GCAGCAGATC GCGGGCCGGG TCGAGGCCAT GGGCGTCGAC
CACGAGTCCC TCGTGGTGGT CAACAACGGC GCCGACACCC GCACCTTCAC CCCGGACGGT
CCCCGGACCG ACGAGGGCCG CTACTTCGTG TACGCCGGCA CCACCTCCGA GTGGCAGGGC
GCGGACGTGT TCGTCGACGC CCTCCGCAGC GTCCTGACGG TCGCCCCGGA CGTGCGCATC
GTGTTCATCG GCCAGGGCAG CGCGTGGGAA GGGCTGCAGG AGCAGGCCCG GGACCTCCCG
GAGGGCTCCG TGGTGTTCAT GGACGCCGTG GCGCCCGCCG AGGCCGCCGT GTGGATCCGT
GGCGCGCTCT CGTCGCTCGT GAGCCTGCGC CCGGGGCTCG GCTACGACTT CGCCTTCCCC
ACCAAGGTCT TCGCGGCGGC TGCCTCGGGA GTCCCCGTGG TCTTCGCCGG CGTGGGTCCG
GCGCGCGACG TCGTCGCCGG TGCCGACCTC GGGTACGCGG TCGAGTACGA CGAGGCCGCG
GTGGCCGAGG CCATGACGGA GCTCGCGACG CGTGAGACGG ACCGCGAGGC CCGGACGGCC
GAGCGCACCC GGCTCTCCCG GTGGGCCCGT CGCTTCGGGT CCATCGAGCG CTCCGGGGAG
GACGCCGCAC GCGCCGTCCT CGAGGTGGCC GCACGGGGCC GTTCCGTCAG CGAGGACCGG
TCGGGCGTCT CCCGCCTGAC GTGA
 
Protein sequence
MVVASRIFVP EPAAASFRLA ALVAALIGQG ADVEVLTVRP APQHGGQDGA PRTDDAETDA 
HIRRWPVLRD ATGTVRGYVP YLSFDIPLFF RLLLCRRPDV VVVEPPPTTA FVVRVVCTLR
RIPYVSYAPD VWSDAARGTP APRVLVDAVA AVESWALRGA RRVLAVSQQI AGRVEAMGVD
HESLVVVNNG ADTRTFTPDG PRTDEGRYFV YAGTTSEWQG ADVFVDALRS VLTVAPDVRI
VFIGQGSAWE GLQEQARDLP EGSVVFMDAV APAEAAVWIR GALSSLVSLR PGLGYDFAFP
TKVFAAAASG VPVVFAGVGP ARDVVAGADL GYAVEYDEAA VAEAMTELAT RETDREARTA
ERTRLSRWAR RFGSIERSGE DAARAVLEVA ARGRSVSEDR SGVSRLT