| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_08000 |
|---|
| Symbol | |
|---|
| ID | 8632436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 910645 |
|---|
| End bp | 911322 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | YKOF-like protein |
|---|
| Protein accession | YP_003313585 |
|---|
| Protein GI | 269794130 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.579165 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.226994 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACACCA CCACCAGCAC GACCATCACC AGTGCGACCA CGAGCGCCGC GACGGGCACC
GAGCCGGCGC CCACCCCCGC GGAGCTCGGC ATCGGCGCGC GCATCACGCT GTCGGTGATG
AGCTCGGACT ACGTCCGCAT CATCACCGAG GCCCTCGCCG TCACGTCGAC CGACGGCCTG
GTCGTCGAGA CCGACCCGGT CTCGACCCGG GTCGCCGGCA CCGAGCAGCG CATCGCGGAG
TACCTCGCCG ACCTCGTCGC GGCGGCCTCC CGGAGCGGCG AGCACGTCTC GGCGGCCGTG
ATGCTCTCGC GCGGCTGCCC GGGCGAGGTC ACCTGCGACC TGCCCGCCGA CCAGCCGTTC
CCCGCGCGGC AGACGGTGGC CCTCCCGCAG ACCGGCGTCC GCGCCGTCGC CCAGTGGGCC
CTCTACCCGC TCGCCGACCA GCCCCTCGCC GGCTCGACCG TGCCCGACCA CATGCGGGAC
ATCTACGCCG CGATCGAGCG GGCACGTGCG GCCGGGACCG TCGTCGGGAG TGATCACTAC
GTCACCCGTC TCGCAGGCGA CGTCGCCGAC GTCCTCACCA CCGTCGTCGA CGCGTGGGTC
ACCGTCGGGC AGTCCGTCCG GCACGTCACC ACCCACGTGA CCATCTCCGT CAACAGCCCG
AGCGAGGCTG CCCGATGA
|
|---|
| Protein sequence | MHTTTSTTIT SATTSAATGT EPAPTPAELG IGARITLSVM SSDYVRIITE ALAVTSTDGL
VVETDPVSTR VAGTEQRIAE YLADLVAAAS RSGEHVSAAV MLSRGCPGEV TCDLPADQPF
PARQTVALPQ TGVRAVAQWA LYPLADQPLA GSTVPDHMRD IYAAIERARA AGTVVGSDHY
VTRLAGDVAD VLTTVVDAWV TVGQSVRHVT THVTISVNSP SEAAR
|
|---|
| |