Gene Sked_07970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07970 
Symbol 
ID8632434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp908245 
End bp909120 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content75% 
IMG OID 
ProductD-alanyl-D-alanine carboxypeptidase 
Protein accessionYP_003313583 
Protein GI269794128 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.131897 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.229438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCCT CTCAGGCGAC CAGCCGTCCC CGCATCCCTC GGCGCGGGTC TGCCGAGAGC 
ACGCCCGCAG CACTGCCCGC CGAGCCACCG CGCCGGCGGA CGACCGTCCG GGCGAACGCC
GCGCACGTCG TGCCCTTCGA CACGGCGTGG CGCGAGCACG CCACCGACCG CTCGGTCGAT
GCGTCGGACG GCATCGTGCT CGGTACCTTC GCCCCGGATG CCCCCGTCGC AGACGAGGTG
GGCTGGCACA TTCGCGCCGC CGTCGGGGCT GACCCCGTCG CCGGACCGTC CCCGACGAGC
CTCCACGCCT CGTCGCCACG TCCCACCCGG CGCACCGCTC TGCTCGTGTC CGTCCCTGTC
GTGGTGCTCA CCCTCGGGCT CGCCGCGGTG GCGCTCGGGG TCTCCAGCAG CGTAGGTGGG
CCAGCAGCCG CTGGTGCACC CGGTGCGTCG TCGGGTCCGC TGGGCGGTGC CGCGGCGCCC
GCCGCCACAG GCCTCGACGC CGAGCTCGAG CGGCGGTTCG CCGGCGCGGT CGAGGCGGCT
GCCGCCGACG GCGTGGAGAT GACGCTCACC TCCGGGTGGC GGTCGGCCGA GGACCAGGCC
GCTCTCGTCG AGATGACCCT GGCCAAGCAC GGCTCCGCAG AGGAGGCGCA CCGGTGGGTG
CTGCCGCCCG AGCGCTCGGC GCACGTGGCC GGGCTCGCGA TCGACGTCGG TCCCACCGAC
GGCGCGCTGT GGCTCGAGCA GCACGGATCC GAGCACGGCC TGTGCCGGGT CTACGCGAAC
GAGCTGTGGC ACTTCGAGCC GGTCGTCGAG CCGGGCGGGA CGTGCCCCGA CCTGCTGCCC
GACTCGTCGA GCGGCTGGGA CGGCATCGAC GGCTGA
 
Protein sequence
MTSSQATSRP RIPRRGSAES TPAALPAEPP RRRTTVRANA AHVVPFDTAW REHATDRSVD 
ASDGIVLGTF APDAPVADEV GWHIRAAVGA DPVAGPSPTS LHASSPRPTR RTALLVSVPV
VVLTLGLAAV ALGVSSSVGG PAAAGAPGAS SGPLGGAAAP AATGLDAELE RRFAGAVEAA
AADGVEMTLT SGWRSAEDQA ALVEMTLAKH GSAEEAHRWV LPPERSAHVA GLAIDVGPTD
GALWLEQHGS EHGLCRVYAN ELWHFEPVVE PGGTCPDLLP DSSSGWDGID G