| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_07520 |
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| Symbol | |
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| ID | 8632389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sanguibacter keddieii DSM 10542 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013521 |
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| Strand | + |
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| Start bp | 860231 |
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| End bp | 861244 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | geranylgeranyl pyrophosphate synthase |
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| Protein accession | YP_003313542 |
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| Protein GI | 269794087 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0633826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTACTG CTTCGATCGG GCTGCCTGTC CCGGACCCAG ACCTCGCCGA GAGGCTCGGC
GTCCGGCTCG CCTACGTCGA GGAGCGCCTG CGCGACTCGG TGACCCACGC CGACGAGCTC
GCGAACACCA CGTCGCGGCA CCTCGTCGAC GCCGGTGGCA AGCGCCTGCG CCCGCTCCTC
GCGCTGCTCA CCGCCGAGCT CGGCGAGTCC GCCCGCCCGG AGGTCATCGA CGCCGCGGTC
GTCGTCGAGC TGACGCACCT CGCGACGCTC TACCACGACG ACGTCATGGA CTCGGCGCCC
CTGCGGCGCG GAGCACCTGC AGCGCACGAG GTGTGGGGCA ACTCCGTGGC CATCCTCACC
GGGGACCTGC TGTTCGCCCG CGCCTCCGTG ACGGTCGCCG GCCTCGGCCC CGAGGCCGTG
CGCTGGCAGG CGGAGACCTT CGAGCGTCTC TGCCTCGGCC AGCTCCACGA GACCGTCGGT
CCGCGCCCCG ACGAGGACCC GGTCCAGCAC TACCTCCAGG TGCTGTCGGA CAAGACGGCG
TCGCTCATCG CGACCTCGGC ACGCTTCGGC GCCCGGTACG CGGGGTGCCG GCCCGAGATC
GTCGAGATCG TCGCGAACTT CGGCGAGAAG GTGGGTGTCG CCTTCCAGCT GGCCGACGAC
GTCATCGACC TCACCTCTGA CGGTGCGCTG ACCGGCAAGA CCCCCGGCAC CGACCTGCGC
GAGGGCGTCC CGACCATGCC GGTGCTGCTG CTGCGCAGCC ACGTGGCCGC GAGCGACGAG
CCCTCCGCCG GGGACCTCGC CCTCCTCGAG CTCCTCGACT CCGACCTCAC CTCCGACGAG
GCGCTCGCCG GTGCTGTCGC CGCCCTGCGC GACCACCCCG TCGTCGCCGA GACGCGCGCC
CAGGCCGTGG CGTGGGCGCA GGACGCCGTC GCCGAGCTCG TCCCCCTGCC CGACGGCCCG
GTCAAGGACG CGCTCGTGGC CTTCGCAGAG TCGCTCGTCG ACCGCACGGC CTGA
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| Protein sequence | MTTASIGLPV PDPDLAERLG VRLAYVEERL RDSVTHADEL ANTTSRHLVD AGGKRLRPLL
ALLTAELGES ARPEVIDAAV VVELTHLATL YHDDVMDSAP LRRGAPAAHE VWGNSVAILT
GDLLFARASV TVAGLGPEAV RWQAETFERL CLGQLHETVG PRPDEDPVQH YLQVLSDKTA
SLIATSARFG ARYAGCRPEI VEIVANFGEK VGVAFQLADD VIDLTSDGAL TGKTPGTDLR
EGVPTMPVLL LRSHVAASDE PSAGDLALLE LLDSDLTSDE ALAGAVAALR DHPVVAETRA
QAVAWAQDAV AELVPLPDGP VKDALVAFAE SLVDRTA
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