Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_07500 |
Symbol | |
ID | 8632387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | + |
Start bp | 856573 |
End bp | 858276 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | NADH dehydrogenase subunit M |
Protein accession | YP_003313540 |
Protein GI | 269794085 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0225564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCG ACCCGAACAT CCCGTGGCTC ACCCTGCTGG CCGTCGTGCC GCTCGTGGGC GCTGCCGTCG TGTGGGCGCT GCCCCACGGC TCCCGCCGGC TCGCGCGCCC CGTCGCGCTC GGCTTCTCCC TCCTCGAGGT GGTGCTCGTC GTCCTCGCGG TCGCCGCCTT CGACACCTCG GCCGCGTCGA CGCACCAGCT CGTCGAGACG CACGCCTGGA TCCCGCAGAT CGGTGCGAGC TACGCGCTCG GCGTCGACGG GGTCGGCCTG CTGCTCGTCG CGCTGAGCGT CGGGCTCGTG CCGCTCGTGA TCGGCGCCGC GTGGCGCGAG CAGGGCGTCG AAGACGCTGT GAGCACTGTG AGCACTGTGA GCACTGAGGG TGCTGCCGGT GCTGCGGGTG CGGCCGCCCC AGCGCGTGGC GCAGGCACCG CGAAGAGCCC CGCCGGAGCC GACGACCGAC CCGGCGAGGG CCGGCTGCGG CACTACCTCG CCCTGGTCCT CGTCCTGCAG ACCTTCATGG TGCTCGTGTT CAGCGCGCGC GACGTGTTCC TGTTCTACGT CGTCTTCGAG GCGATGCTCG TCCCCGTCTA CTTCATGATC GGCGGGTTCG GCGAGGGGGC CCGGCGCCGC TACGCCGCGA TCAAGTTCCT CATCTTCTCG CTCGCCGGCG GCCTCGTGAT GCTCGCCGCC GTGATCGTCC TCTACGTGCA GGGCCCCGGT GGGGAGCAGG GCTTCCTCAC CGAGAACCTC ACGGGCCTGG GCCTCGACCA GACGACGGAG CGGCTGCTGT TCCTCGGGTT CTTCCTCGCC TTCGCGATCA AGGCCCCGAT GTTCCCGGTG CACTCCTGGC TGCCCGACGC GGCCGAGCAC GCCCCCGCAG GCACCTCGGT GCTGCTCGTG GGGGTGCTCG ACAAGGTCGG CACCTTCGGG ATGCTCACCC TCTGCCTGCC GCTGTTCCCC GACGCGAGCC GGTGGGCCGC GCCCGTGGTC ATCGTGCTCG CCGTGGTGTC GATCATCTAC GGGGCGCTGC TGGCGCTCGG CCAGGACGAC CTCATGCGGC TCGTCGCGTA CACCTCGGTC TCGCACTTCG GCGTGATCGT GCTCGGCATC TTCGCCTTCA CCCAGCTGAG CGTCTCCGGC GCGTCCTTCT ACATGGTCAA CCACGGGATC TCGACCGGGC TGCTGTTCCT CGTCGGCGGC TTCGTGGTCC GGCGGACCGT CTCCGGGCGC TCGCGTCGGA TCAGCGAGCT CGGCGGCCTG GCCAAGGTCA CCCCGGTGCT CGCCGGCGTG TTCCTGCTCG CCGGTCTCTC GGCCCTGTCG CTGCCCGGTC TGTCGACCTT CGTCTCCGAG ATCATGGTGT TCATCGGTGC CTTCGGCCGG TACCCCGTCG CGGCGATCGT CTCCGCCGTC GTGGTCGTGC TCGCCGCGCT GTACGTGCTG CTCACCTACC AGCGGATCTT CACCGGTCCG GTGCGCCCCG AGCTCGCCGA GGTCCGTGAC CTCTCGGCCC GGGAGCGCTG GGTCGTCGCC CCGCTCGTCG TCGCGCTGCT CGTCCTCGGC TTCGTGCCGG GGCCGGCGCT CGACCTCGTC GGCGACCCCG CCGCCGTGAC CCTCGAGCAG GTCGGCGTCA CCGACGTCGT CCCGCAGCCC GAGGCGGCCG ACGCCGCGCT CGTCGACGCA CCGACCGAGG GGAGCGACTC ATGA
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Protein sequence | MTIDPNIPWL TLLAVVPLVG AAVVWALPHG SRRLARPVAL GFSLLEVVLV VLAVAAFDTS AASTHQLVET HAWIPQIGAS YALGVDGVGL LLVALSVGLV PLVIGAAWRE QGVEDAVSTV STVSTEGAAG AAGAAAPARG AGTAKSPAGA DDRPGEGRLR HYLALVLVLQ TFMVLVFSAR DVFLFYVVFE AMLVPVYFMI GGFGEGARRR YAAIKFLIFS LAGGLVMLAA VIVLYVQGPG GEQGFLTENL TGLGLDQTTE RLLFLGFFLA FAIKAPMFPV HSWLPDAAEH APAGTSVLLV GVLDKVGTFG MLTLCLPLFP DASRWAAPVV IVLAVVSIIY GALLALGQDD LMRLVAYTSV SHFGVIVLGI FAFTQLSVSG ASFYMVNHGI STGLLFLVGG FVVRRTVSGR SRRISELGGL AKVTPVLAGV FLLAGLSALS LPGLSTFVSE IMVFIGAFGR YPVAAIVSAV VVVLAALYVL LTYQRIFTGP VRPELAEVRD LSARERWVVA PLVVALLVLG FVPGPALDLV GDPAAVTLEQ VGVTDVVPQP EAADAALVDA PTEGSDS
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