Gene Sked_07280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_07280 
Symbol 
ID8632365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp831442 
End bp832530 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313518 
Protein GI269794063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.776305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0453221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCGAA CCACCCGCAC GCCGATCGCC ACCCTCCGGC GGGACCGTCG GACGACGCTC 
GCCGCCGCGC TGGTCTCGAC CGCGCTGCTG CTCGCCGGCT GCTCGGGGTC CGGCGGTGCC
ACCGCGACCG CAGGGGTGAC CCCGGACGCG ACCGCAGACC GGTCCGCCGC ACCTGACCCG
GCGCTGCCCA CCACGTGGCC GCTCACCGGT GTGGCCTCCG AGGAGATCGC CAACCGGCCG
GCCCTCGCGG TCAAGATCGA GAACTCGCGC GAGGCCCGCC CGCAGACCGG CCTGGAGAAC
GCCGACGTCG TCTGGGAAGA GGTCGTGGAG GGTGGCGTCA CGCGCTACAT CGCGGTCTAC
CACTCCCAGC AGCCCGAGGT CGTCGGGCCG ATCCGCTCGG TGCGCCCCAT GGACGCCCAC
ATCATCGCGC CGCTGCACGG CCTCATGGTG TTCTCCGGCG GGCAGCCGCC CTTCGTCGAC
GCCGTCGCGG GCAGCGGGCT CCAGGTGGTC TCCAACGACC GCGGCGACGC CGGGTTCTCG
CGGTCGACCG ACCGCCGCGC CCCGCACAAC GTCTACGGTG CGCTCGCCGA GTTCGCCGGC
CAGGCCGACG CCGACCACCT CGACTCCCCG GCGCAGCAGT TCCTCTTCGC GGAGGACGCC
GCCACGGCCT CCACGGCCGC CGGTACCCCG GCGTCGGTGC TCGGGATCCG CATGTCCGGC
TACAGCACGC CGTCCTGGGC CTTCGACGCG GCCTCCGGCC GGTACCTGCG CTCCGAGGGC
ACCACGCCCG CCGTGTCGGT CACGGGGGAG CAGCTCGCCG CGACGAACGT CGTGGTGATG
AGCGTCCCGG TGGTCGACAC GGAGTTCCGC GACCCCGCGG GCACCCCGGT CCCGGAGACC
CAGGTGATCG GCACGGGCGA GGCGCTCGTC GTCTCGGGCG GGATGTCGGT CCCGGCGACG
TGGAGCAAGG AGAGCACCCT CGCGCCGGTC ACCCTCACCG GGGCCGACGG CGAGCCGGTC
TCGCTGGCGC CCGGCAACAC CTGGGTCGAG CTCGTCCCGA GCAACGGCGG CGAGTACACG
GTCGGATGA
 
Protein sequence
MQRTTRTPIA TLRRDRRTTL AAALVSTALL LAGCSGSGGA TATAGVTPDA TADRSAAPDP 
ALPTTWPLTG VASEEIANRP ALAVKIENSR EARPQTGLEN ADVVWEEVVE GGVTRYIAVY
HSQQPEVVGP IRSVRPMDAH IIAPLHGLMV FSGGQPPFVD AVAGSGLQVV SNDRGDAGFS
RSTDRRAPHN VYGALAEFAG QADADHLDSP AQQFLFAEDA ATASTAAGTP ASVLGIRMSG
YSTPSWAFDA ASGRYLRSEG TTPAVSVTGE QLAATNVVVM SVPVVDTEFR DPAGTPVPET
QVIGTGEALV VSGGMSVPAT WSKESTLAPV TLTGADGEPV SLAPGNTWVE LVPSNGGEYT
VG