Gene Sked_05970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05970 
Symbol 
ID8632234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp676263 
End bp677513 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003313391 
Protein GI269793936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.215933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCACAT CTCGTGACAA TCCATTCCAA CCTGGCTCCG ACGTCGTCCC GGCCGTCTGG 
GCCGGTCGGA CGGCGCACCT GAGCGACTGG CGTGACGTCC TGAGGCCGAG GCTCATCGAC
GGGCTCTTCG AGCGAGGACG CACGGTCCTC GGCGAGCCGG GGCTGGGCAA GTCGTCGCTC
GTGCGTCGGA TCGCTGACGA CGCGGAGCGG GCCGGCGACT GGGTGACGCC ACAGATTCGG
ATCGCACTCG GCTCGGACCC GATCAAGCGG CTCGCGACCG AGGCCCTCCG CCTCGCTGAC
AAGGCGGGCC TGTCTGCGGC TCGGGAGCAC CGCGTGGGAC GACTCCTCGA ACGGGTCCAG
TCGGTCGCGG TCAGCGGTGC GTCGCTCTCG CTCCGAGCGT CGGAAGGGCA CGAGCCGCAC
ACAGACCTGA CTGACCTCTT GGTCGAGATC GGCCTCGCCG CGGTCGACCG GGGGAACGTG
GTCCTCATCC ACCTCGACGA GATCCAGAAC ATCACCGACG AGGTCGCGCT CTCGCAGGTG
CTCATCGCCC TCGGCGACTC GATCACCCGG AAGGTCGAGG TGCGCGTCCC CTCGATCGGT
ACCGTCGAGC GTTCGCTGCC CATCGCGGTG TACCTGACGG GGTTGCCGGA GTTCGACGAG
ACGTCAGGGG CTCGGAAGGG TGCGACGTTC GCCCGTCGGT TCCGCACCAC CGTCCTCGAG
CCGATCGACG ACGACGACCT GCGCAGTGCC CTGCGTCTGT TCGTCGTCTC CGGGTGGGGG
GTCTCGGACG ACGCCGGCGG CGTGGGTGTC GTCCGGATGG AGGAGGCTGC GACCGAGGCG
ATCATCGACC TCTGCCGCGG AGAGCCGTTC CTGTTCCAGC TGGTGGGCGA GCGGGCCTGG
TATGCAGGGA CTGGATCCGT GGTCACTCGC GGCGAGGTCC TCGACGGGTG GCGTCAGGCG
CAGTCGGAGG CCGTCGCTCA CGTCGAACGG ATCCTCGACA GGTTGCCTGA CCGAGAGCGT
GACTTCGTCA TGGCGATGGC CGAGCTGTCC CCGGGAGCAC GGTCTTTGTC CGAGATCGCG
GCCGCGGCCG GGTTCTCGAA GGCTGCCGAC GCGGGGACCG CCTCGCAGCG CCTGGACCGT
GTGCGCGGGA TCATCAGCCG AGGGCGGCCC TACACGTTCC GCCACCGCGC GGTCGAGGCG
TTCCTCACGA GCGACTGGCC GGACGGCACC GGGTCCTCGC GGACCCTCTG A
 
Protein sequence
MRTSRDNPFQ PGSDVVPAVW AGRTAHLSDW RDVLRPRLID GLFERGRTVL GEPGLGKSSL 
VRRIADDAER AGDWVTPQIR IALGSDPIKR LATEALRLAD KAGLSAAREH RVGRLLERVQ
SVAVSGASLS LRASEGHEPH TDLTDLLVEI GLAAVDRGNV VLIHLDEIQN ITDEVALSQV
LIALGDSITR KVEVRVPSIG TVERSLPIAV YLTGLPEFDE TSGARKGATF ARRFRTTVLE
PIDDDDLRSA LRLFVVSGWG VSDDAGGVGV VRMEEAATEA IIDLCRGEPF LFQLVGERAW
YAGTGSVVTR GEVLDGWRQA QSEAVAHVER ILDRLPDRER DFVMAMAELS PGARSLSEIA
AAAGFSKAAD AGTASQRLDR VRGIISRGRP YTFRHRAVEA FLTSDWPDGT GSSRTL