Gene Sked_05960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05960 
Symbol 
ID8632233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp675351 
End bp676172 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content74% 
IMG OID 
ProductATPase component of various ABC-type transport systems with duplicated ATPase domain 
Protein accessionYP_003313390 
Protein GI269793935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.219584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG ACACAGCGGC CGGCGAGAGC GACGGAGCAG GCACGACCTC GGGCGTCCCT 
CTCCTCGCGC TGCAGGGCGT CCGCCGGGAG TTCGGCGGTC GCGGTCGGAC GACAACGGCC
CTCGACGGCG TCGACATCGC CGTGCACGAG GGGCGCAGCG TCGGGATCGT GGGGGAGTCC
GGGGCGGGGA AGTCGACGCT GCTGCGACTC ATGCTCGGCC TGGACACCCC GACGTCGGGG
CAGGTCACGT ACCGCGGCCA GACCCTCGAC CGCCGTGACC GGGCGCGGCT CAAGCGCTTC
CGGCGTGAGG TGCAGGTCGT GTTCCAGGAC CCGCGCTCGT CGCTGGACCC GCGCATGACC
GTCGCGCAGA TCGTCGCCGA GCCGCTGCAG TCGCTGCGCA TCGGCGCCGA CCAGCGCGAG
CGTTCTGCGC GCGTCGACGA GGTGCTCGGC TGGGTGGGCC TCGACGCCGA CGCGCGGCGC
AAGTACCCGG CGCAGTTCTC GGGCGGGCAG CGCCAGCGCA TCGCCATCGC GCGGGCCCTC
GCCCCGTCGC CGAAGGTGCT CGTCGGCGAC GAGCCGGTGA GCGCGCTCGA CGTCTCGGTG
CGCCAGCAGA TCATGGAGCT GCTGGCCCGG CTGCGCGCCG AGCTGGGCCT CACCCTGGTG
CTGGTCAGCC ACGACGTGGC GATCGTCGGG CAGCTCTGCG AGGAGACCGT CGTGCTGCGC
GGCGGTCGCG TCGAGGAGGC GGGCGAGACC CGTCAGGTGC TCACGCGACC GGCGTCGCCG
TACACCCGCG CCCTGCTCGA CGCGGTGCCG ACGCTGGGGT GA
 
Protein sequence
MSEDTAAGES DGAGTTSGVP LLALQGVRRE FGGRGRTTTA LDGVDIAVHE GRSVGIVGES 
GAGKSTLLRL MLGLDTPTSG QVTYRGQTLD RRDRARLKRF RREVQVVFQD PRSSLDPRMT
VAQIVAEPLQ SLRIGADQRE RSARVDEVLG WVGLDADARR KYPAQFSGGQ RQRIAIARAL
APSPKVLVGD EPVSALDVSV RQQIMELLAR LRAELGLTLV LVSHDVAIVG QLCEETVVLR
GGRVEEAGET RQVLTRPASP YTRALLDAVP TLG