Gene Sked_05020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05020 
Symbol 
ID8632139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp554386 
End bp555549 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content74% 
IMG OID 
Productglycosyltransferase 
Protein accessionYP_003313297 
Protein GI269793842 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG GCAGCGTCGC ACAGGGGGGC GCAGAGGGCC GTCCGCTGAC CGTCGGGCTG 
GTCATCGACG ACTCCCTCGA CCGGCCCGAC GGCGTGCAGC AGCACGTGCT CACCCTGGGG
GAGTGGCTGA GCGCGCAGGG GCACACGGTC CACTACCTCA CGAGCACCAC GGTCCGCACG
GACCGGCCGC GCATGCACTC GCTCGCCAAG AACCTGCGGC TGCGCTTCAA CGGCAACCGG
CTCGGCGTTC CGCTGCCCGC TCCGGCCGCC GGGATCACGA CGCTGCTCGA CGAGGTCGAC
TTCGACGTGC TGCACGTCAA CATGCCCTAC AGCCCGCTGC TCGCCGGGCG TGTGGTGAGC
CGGGCGCGGG CCGGGACGAC GGTCGTGGGG ACCTTCCACA TCCTGCCGTG GACCTGGCTC
ACCCGGTGGG GCGCACGCGG TCTCGGACTG GTGCAGCGGC GCCAGCTGCG ACGGTTCTCC
CGGGTGATCG CGGTGTCCAC GCCGGCCGCG GCCTTCGCGG CCGAGGCGCT GCGCGTCGAG
CCGGTGGTCA TCGGCAACCC CGTCGACGTC ACCCGGTTCA CCCGGGCGCG CGACGCCGAG
CTCGCCCGCT GGGAGCCGTC CGACGCCGAC CCGGTGCGCA TCGTGTTCCT CGGGCGGCTC
GTCGAGCGCA AGGGAGCCGG CGAGCTGCTG CGCGCGGTGG CCCGCGCACG GTCGCTCACC
CAGGTCCCCG TCGAGGTGGT GGTCGGCGGC ACCGGACCGC TCCGTGAGGA GCTCGAGTCC
TACGTCGCGA CCGCCGGGCT CGAGGGCGTG AGCTTCATCG GCTTCGTCGA CGAGGACGAC
AAGGCGGCGC TGCTGGCCGG CGCCGACGTG GTCGCCCTCC CGTCGACGGG CGGTGAGAGC
TTCGGCATCA GCGTCGTCGA GGCCCTCGCG GCCAGCCGCG GCGTGGTCCT CGCCGGGGAC
AACCCCGGCT ACCGGACGGT GATGGAGGGG CTCGAGGACC AGCTCGTCGA CGCGACCGAC
ACCGAGACCT TCGCCGCGCT CCTCGCCCGC CACGTCGGCG ACGCGGCGGC GCGGACCGCG
GCGAGCGCCC GGCAGGTCGA GCACGCCGGC CGCTTCGACG TCGACGTCAT CGGCGCGCAG
GTCGTCGAGG TCTACCGGGC GTAG
 
Protein sequence
MSAGSVAQGG AEGRPLTVGL VIDDSLDRPD GVQQHVLTLG EWLSAQGHTV HYLTSTTVRT 
DRPRMHSLAK NLRLRFNGNR LGVPLPAPAA GITTLLDEVD FDVLHVNMPY SPLLAGRVVS
RARAGTTVVG TFHILPWTWL TRWGARGLGL VQRRQLRRFS RVIAVSTPAA AFAAEALRVE
PVVIGNPVDV TRFTRARDAE LARWEPSDAD PVRIVFLGRL VERKGAGELL RAVARARSLT
QVPVEVVVGG TGPLREELES YVATAGLEGV SFIGFVDEDD KAALLAGADV VALPSTGGES
FGISVVEALA ASRGVVLAGD NPGYRTVMEG LEDQLVDATD TETFAALLAR HVGDAAARTA
ASARQVEHAG RFDVDVIGAQ VVEVYRA