Gene Sked_04680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_04680 
Symbol 
ID8632105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp522284 
End bp523189 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content69% 
IMG OID 
ProductABC-type metal ion transport system, periplasmic component/surface antigen 
Protein accessionYP_003313264 
Protein GI269793809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGCT CCACCCGTAC GGCCCGCACC CTCGGCGCCG CCAGCCTCGT CGCAGCTCTT 
ACCCTGGGCC TCGCCGCGTG CTCCTCGGAC GACGCCTCGT CCGACGCCGC CAAGGGCGAC
GAGTCCAACC CCGTGGTCAT CGGTGTCGTC AACGCCGCAG CCGACGACCA GTGGTCCGTC
TTCGAGGAGC AGGCCGAGGC CGAGGGCATC TACGTCGAGA TCAAGGACCT CGGCAGCTAC
GACCTCCCCA ACGCCGCGCT CACCTCCGAG GAGCTGGACC TCAACCAGTT CCAGCACCTG
CAGTACCTCG CGGAGTACAA CACCAACACC GGTGAGGACC TCACGCCCAT CGGCGCGACG
GCCGTCTACC CGCTGAGCCT CTACTCCTCG AAGTACACCT CGGTCGACGA GATCCCGGCC
GGCGCCGAGA TCGCCATCCC GAACGACCCG ACCAACCTGG CCCGCGCGCT CCTCGTTCTG
CAGGACGCCG GGCTGCTCGA GCTCAAGGAC GGCGGCTCCT CCGTGTCCAC CGAGCTCGAC
GTGCTGCCGT CGTCGACCGT CACCGTGACC CCGGTCGACG CCACGCAGAC CGCGGTGAAC
CTCGACAGCA TCGACGGTGC GGTCGTCAAC AACGACTTCA TCAAGGACGC CGGCCTCGCC
GCCGAGGACG CGCTCTACCA GGACTCGGCC GAGGCCGAGG GCGCCCGCCC CTACATCAAC
GTGTGGGTCT CCCGCGCGGC TGACAAGGAC GACGAGACCT TCCTCAAGCT CGTCGAGATC
TCGCACTCCC CCGAGGTCGA GGCAGCGCTC CTCGAGGCGT CCGGCGACAG CGCCGTGATC
GCCGACCAGG ACGGCCCGAC GCTCCAGGGC TACCTCGACG AGATCCAGGC GAACCTCCAG
GGCTGA
 
Protein sequence
MSRSTRTART LGAASLVAAL TLGLAACSSD DASSDAAKGD ESNPVVIGVV NAAADDQWSV 
FEEQAEAEGI YVEIKDLGSY DLPNAALTSE ELDLNQFQHL QYLAEYNTNT GEDLTPIGAT
AVYPLSLYSS KYTSVDEIPA GAEIAIPNDP TNLARALLVL QDAGLLELKD GGSSVSTELD
VLPSSTVTVT PVDATQTAVN LDSIDGAVVN NDFIKDAGLA AEDALYQDSA EAEGARPYIN
VWVSRAADKD DETFLKLVEI SHSPEVEAAL LEASGDSAVI ADQDGPTLQG YLDEIQANLQ
G