| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_00960 |
|---|
| Symbol | |
|---|
| ID | 8631734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 96764 |
|---|
| End bp | 98191 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | drug resistance transporter, EmrB/QacA subfamily |
|---|
| Protein accession | YP_003312903 |
|---|
| Protein GI | 269793448 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCGC ACGCCACCCG GCGCGACTGG ATCGTCCTCG CGACGGTCGC GCTCGTCCAG
CTCGTCGTCG TCCTCGACGG CACCATCGTC ACCATCGCCC TCCCGCAGGC GCAGGCCGAC
CTCGCGCTCT CCGACAGCGA GCGGTCCTGG GTCGTCACGG CCTACGCGCT CGCCTTCGGC
GGTCTGCTGC TCCTCGGCGG ACGCCTGGTC AACTACCTCG GCCTCAAGAA GGCCTTCATG
ATCGGCATCG TCGGCTTCGC GATCGCCTCC GGCTTCGGCG GCATCGTGCA GAACGGCACC
GAGCTGATCA TCGCCCGCGG ACTGCAGGGC GTGTTCGCCG CGCTGCTCGC GCCGGCTGCC
CTCGCGATCC TCACCCTGAC CTTCACGTCC GGGCGCGAGC GCAACATCGC CTTCGCCGTG
TTCGGCACCG TCGCCGGAGT CGGCGCAGCG ATCGGCCTGC TCCTCGGCGG CCTGCTCACC
GAGTACGCGA CCTGGCGCTG GTGCCTGCTC ATCAACGTCC CGATCGCGGT GCTCATCGTC
GTGGTCGGCT CGGTCACCCT CCAGCACTCG CCGCCGGACC GTGAGAAGCC GATCGACGGC
TGGGGTGCGC TCCTCGTGGT CCTCGGCCTC GGCGCCGTGG TGTTCGGCCT CACCGAGGCC
GAGAAGAGCT GGACCTCCCC GCAGGTGATC GTCTCGCTCG TGCTCGGGGT GCTGCTCGTG
GTCGCCTTCG TGATCACGCA GACTCGTCGC GCCAACCCGC TGCTGCCGCT GCGCGTCGTC
ACCCACCGGG TGCGGGGGAC GGCCTTCAGC ATCCAGGCCA TCGCCGGTGC CGTGATGATC
GGCTCGATGC TCTACCTGAC GCTGCACCTG CAGGTCGTCC TCGGGATGAA GCCCTTCGAG
GCGGGTCTGG CGACCCTCCC GCAGACGGTG CTCATCATGA TCGTGGCGGG TGTGGGCTCG
CGATACCTCG AGGCCATCGG CCCCAAGCCG TTCCTCGTCC TCGGTCCGGT CCTCACCGGC
GCCGGTCTCT TCTGGCTCTC GTTCATCACG GCCGACGGTG GCTACGCGAC GCACGTCCTG
CCCGGCCTCG CCCTCACCGG CGTCGGCATG GGCATGGTGT TCCTGCCGCT GCAGAACGTC
GCGCTGCGTG GCGTGAGCCC TCACGACGCC GGTGTCGCCG GCGCCCTGTC GACCGCCTCG
ATGCAGATCG GCGGCTCGGT GGGCCTGGCC GTCTGGACCA CGGTCGCGGC CGGTGCGACC
GGCACCGCCA TGACGCTCGA CGCCCTCGTC GACGGCTACT CGGCCGTGTT CGTCGGCAGC
GCGGGCCTCA TGGTGCTCGG TGCGGTCATC GCGCTCGTCG CGCTGCCCAA GCACGACCGC
GCGGCCGTCG CCGCCGAGGA GAAGGTCATG GTCCCGACGG GCCACTGA
|
|---|
| Protein sequence | MSSHATRRDW IVLATVALVQ LVVVLDGTIV TIALPQAQAD LALSDSERSW VVTAYALAFG
GLLLLGGRLV NYLGLKKAFM IGIVGFAIAS GFGGIVQNGT ELIIARGLQG VFAALLAPAA
LAILTLTFTS GRERNIAFAV FGTVAGVGAA IGLLLGGLLT EYATWRWCLL INVPIAVLIV
VVGSVTLQHS PPDREKPIDG WGALLVVLGL GAVVFGLTEA EKSWTSPQVI VSLVLGVLLV
VAFVITQTRR ANPLLPLRVV THRVRGTAFS IQAIAGAVMI GSMLYLTLHL QVVLGMKPFE
AGLATLPQTV LIMIVAGVGS RYLEAIGPKP FLVLGPVLTG AGLFWLSFIT ADGGYATHVL
PGLALTGVGM GMVFLPLQNV ALRGVSPHDA GVAGALSTAS MQIGGSVGLA VWTTVAAGAT
GTAMTLDALV DGYSAVFVGS AGLMVLGAVI ALVALPKHDR AAVAAEEKVM VPTGH
|
|---|
| |