Gene Shewmr7_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3943 
Symbol 
ID4257836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4685129 
End bp4685554 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content44% 
IMG OID638124632 
ProductSH3 type 3 domain-containing protein 
Protein accessionYP_739977 
Protein GI114049427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAGGT TATGGATATT GCTGTTAGTT TTTGTTCTGG GGCATCCAAT ATCCATTGCT 
AACGCCAAAA ACTGTAAAAA GGGTCAACCG TGCGGCAATT CCTGCATTTC TTGGAACAAA
ACTTGTCGTA TCGGATCGGC AAATACAAGT GCTAGCACTC GTACCGTGGT GTCACAAGAG
AAAAGCCATT TGCAATCGCC AAACGCGGAC ATTGCGAGCA ATCCTGTTCT GGAGAATGGA
CAGCTATATG AAGTGACTAT CGATAAGCTC AATATCCGTA ATCAACCTAA TAAAAATGCG
GAGTTACTGG GTGCACTCTC AAAAGGTGAG CGCATTAGTG TGCTGGCTGC AAGCGGTGAT
TGGAAGGCCT TTCTATTTCA AGACAAACTC GCTTGGGTAT TTTCGAAACA TTTGAAAGCC
GTATAA
 
Protein sequence
MNRLWILLLV FVLGHPISIA NAKNCKKGQP CGNSCISWNK TCRIGSANTS ASTRTVVSQE 
KSHLQSPNAD IASNPVLENG QLYEVTIDKL NIRNQPNKNA ELLGALSKGE RISVLAASGD
WKAFLFQDKL AWVFSKHLKA V