Gene Shewmr7_3914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3914 
Symbol 
ID4257807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4652675 
End bp4653703 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content48% 
IMG OID638124603 
Productubiquinol oxidase, subunit II 
Protein accessionYP_739948 
Protein GI114049398 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR01433] cytochrome o ubiquinol oxidase subunit II 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTAATTC GAAATTTATG TAAAGTAGCA TTCGCGGCGA TAGCCCTGAT GCTCGCAGGC 
TGTGATGGCG GCGTATTGGA TCCCAAGGGC CAGATCGGTG TCGATGAAAA GCACCTGATC
ATCATCGCTA CCCTACTCAT GCTGATTGTG GTTATCCCCG TGATCTTCAT GACTTTGTTC
TTCGCATGGA AATACCGCGA TGGCCGAGAT CATGAGGTTT ACGCCCCCAA ATGGTCCCAT
TCAAGCGCGA TTGAAACCGT GGTTTGGATT GTGCCTATTG TGATCGTATT GATTTTGGGC
GTGATCACTT GGGGTTCAAC CCATGATCTC GACCCTTACA AACCACTCGA ACACGAGGCC
AAGCCAATTA CGGTTGAAGT GGTTTCTATG GACTGGAAAT GGTTGTTTAT CTATCCAGAA
CAAGGTGTTG CATCGGTAAA CGAACTGGCT TTCCCAGCGA ACGTACCAGT GAACTTTAAG
ATCACCTCTG ATACCGCAAT GAACTCTTTC TTTATCCCGC AGTTAGGTAG CCAAATCTAC
TCAATGGCTG GGATGACGAC TAAGTTGCAC CTGATTGCCA ACGAACCCGG TACCTATGAC
GGTATTTCCG CTAACTATAG CGGCGCAGGT TTTGCGGGCA TGAAGTTTAA AGCCATTGCC
ACGCCAACGG CAGCCGACTT CGATGCTTGG GTAGCCAAGG CAAAACAACA GGCGACTAAG
ACCTTAGACT CTGCGACTTA CCAAGCCTTA GCACAGAAGA GTGAAAACAA TCCTGTTGAA
TACTTTGGCT CAGTTAGTCA CGGCATGTTC GATCAAATCG TTATGCAATA CATGCACATG
GACTCAAATG AGCACATGGC AGGCCATGAA GGTATGGAAC ACATGAGTGC CGACCACAAT
ATGGCTGGCA TGCACCACGA TATGGCGCAT ATAGCGAGCG AACAGAAGAT GGCCGACATG
GAAAGCTCAA CCCATTCTGA CACTTCATCA ACAGAACACT CATCCACTCA CCAAGTGGAG
GCGGAGTAA
 
Protein sequence
MLIRNLCKVA FAAIALMLAG CDGGVLDPKG QIGVDEKHLI IIATLLMLIV VIPVIFMTLF 
FAWKYRDGRD HEVYAPKWSH SSAIETVVWI VPIVIVLILG VITWGSTHDL DPYKPLEHEA
KPITVEVVSM DWKWLFIYPE QGVASVNELA FPANVPVNFK ITSDTAMNSF FIPQLGSQIY
SMAGMTTKLH LIANEPGTYD GISANYSGAG FAGMKFKAIA TPTAADFDAW VAKAKQQATK
TLDSATYQAL AQKSENNPVE YFGSVSHGMF DQIVMQYMHM DSNEHMAGHE GMEHMSADHN
MAGMHHDMAH IASEQKMADM ESSTHSDTSS TEHSSTHQVE AE