| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3892 |
|---|
| Symbol | |
|---|
| ID | 4257924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 4619396 |
|---|
| End bp | 4619923 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 638124581 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_739926 |
|---|
| Protein GI | 114049376 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT CGGAAAAAAT TAGTGCAATC ATGTACAAGC TATTGGTTGA AAAAGGAATG
GATTCATTTT CTGTAGTGGA TGCTCGGAAT CTACTGGTCG CACTGGATGC AAAATACACC
GACCTCGCTG CTACGAGGCA AGTTGTTTAT CGTCAAATTA ATAAGTGTCT AAAACAAGGA
TGGCTTGTTA GCACTGGTGT GGGTAGACAG AAGAAATTTT ATGTATCTGA CAGCTTGAAG
GAGATGATTG CAGGCAATAA AAATGCTTTA AAAGCATCAG AGAATAAGTC TAAGCCAAAT
GATTACTCAG TCTTACTGAC AGAACTCAAG GAAAGTGAAG GTGAGCTAAA AATAGTTCTA
GGAGAAATCG ATGAATACCG ATCATTGCTG AAGCGATTTC CTGAGCTTCT TTTGACGATT
CAGCCGTTGT TACAAGACTC TAAAGTTCGT TCTGCCACGT TGTTAGGTAA GGTCAATGGC
TTGACCAAAG TCTTACAGAC TCTTCATTTG GAGGGTTCTG GATGTTAA
|
|---|
| Protein sequence | MKRSEKISAI MYKLLVEKGM DSFSVVDARN LLVALDAKYT DLAATRQVVY RQINKCLKQG
WLVSTGVGRQ KKFYVSDSLK EMIAGNKNAL KASENKSKPN DYSVLLTELK ESEGELKIVL
GEIDEYRSLL KRFPELLLTI QPLLQDSKVR SATLLGKVNG LTKVLQTLHL EGSGC
|
|---|
| |