Gene Shewmr7_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3796 
Symbol 
ID4255380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4511814 
End bp4512383 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content51% 
IMG OID638124487 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_739832 
Protein GI114049282 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAA TGAAATTTTT GTGTGACACC AAGCGCTGCA TCGAATGTAA CGGCTGTGTC 
ACCGCATGTA AAAACGAAAA CGATTCCGCT CTCGAGTGGG GTATCCAACG CCGCCGCGTA
GTGACTATCA ATGATGGTCA ACCCGGTGAA GCTTCAATCT CTGTCGCCTG TATGCATTGC
TCAGACGCGC CATGTATGGC GGTTTGCCCT GCAAACTGCT TCTACAGAAC CGAAGACGGC
ATTGTGCTAC ATAACAAAGA TGCCTGTATT GGTTGCGGTT ACTGCTTGTA CGCCTGTCCA
TTTGGCGCAC CACAGTTCCC GAAAAAAGGT GCTTTTGGTA GCCGCGGTAA GATGGATAAA
TGTACCTTCT GTGCCGGTGG CCCAGAAGAA AACCACTCAG AGGCAGAGCG CCAGAAGTAC
GGTTCAAACC GTATTGCCGA AGGCAAACTG CCAATGTGCG CAGAACTATG TGCGACTAAG
GCCCTGTTAG CGGGTGATGC AGAAGTGGTT TCTAGCATCT TCCGTGAGCG TGTGGCTTAC
CGTGGCGCTA AAAACGCGGC TTGGAATTAA
 
Protein sequence
MATMKFLCDT KRCIECNGCV TACKNENDSA LEWGIQRRRV VTINDGQPGE ASISVACMHC 
SDAPCMAVCP ANCFYRTEDG IVLHNKDACI GCGYCLYACP FGAPQFPKKG AFGSRGKMDK
CTFCAGGPEE NHSEAERQKY GSNRIAEGKL PMCAELCATK ALLAGDAEVV SSIFRERVAY
RGAKNAAWN