| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3678 |
|---|
| Symbol | |
|---|
| ID | 4254888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 4379336 |
|---|
| End bp | 4379884 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638124366 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_739715 |
|---|
| Protein GI | 114049165 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4648] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0896773 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGTCC TTCTACAAGT ACTAACCGCA CTCGCGCTGA TTGCTTATCC AGTCGCCGTG
TATTTAGGAC TGAATTATCT GCCAGCAGGC ACCATAGCCC TAGTGCTATG CCTCTTGTTG
GTAGTGCGTT TAATGCTGCA AAAGCAAAAG GTTAAAACCT TAGTTTTGCC TTTGCTTGTG
GGGATTGCGC TCACAGCGGG CAGTTTTGTC GCCAAACGCA GCGACTGGCT CTTGTATTAC
CCGGTGGTGA TAAACCTCAC CATGTTAGCC CTGTTTAGCT ACTCGCTATA CCAAGGCCCG
AGCATGATTG AACGGCTCGC ACGGCTCAAA GAGCCCGACT TGCCGGATGA AGCCATAGGT
TATCTTAAAA AAGTCACCCT GCTTTGGTGT GGCTTATTTA TCCTAAACGG CACTGTGGCG
GCCTATACCG CCGCGTTTAC CAGCCTAGCA ACTTGGACCT TGTATAACGG TTTGATTGCA
TACGTACTCA TGGGACTGCT CCTCGGTGGG GAATGGTTAT ATCGCAGCTT TTGGTTGAAG
AAGACATGA
|
|---|
| Protein sequence | MRVLLQVLTA LALIAYPVAV YLGLNYLPAG TIALVLCLLL VVRLMLQKQK VKTLVLPLLV
GIALTAGSFV AKRSDWLLYY PVVINLTMLA LFSYSLYQGP SMIERLARLK EPDLPDEAIG
YLKKVTLLWC GLFILNGTVA AYTAAFTSLA TWTLYNGLIA YVLMGLLLGG EWLYRSFWLK
KT
|
|---|
| |