Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3620 |
Symbol | frdB |
ID | 4255039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 4300239 |
End bp | 4300970 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638124304 |
Product | fumarate reductase iron-sulfur subunit |
Protein accession | YP_739657 |
Protein GI | 114049107 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCAAG GTCGCCAGCT AACCTTTAAT ATTTTTCGTT ATGATCCGCA GGAGCCAAAC GATAAGCCGA AGATGGTGCG TTATCAGCTC ACCGAAACGC CGGGAATGAC GGTATTTATC GCACTCAATA AACTTAGAGA AGAGCAAGAT ACGTCGTTGC AGTTTGACTT TGTCTGTCGT GCGGGGATCT GCGGTAGTTG CGCCATGGTG ATCAATGGTT TCCCTACTTT GGCTTGCCGT ACTTTAACCG CCAAATATCC TAAGGGCGAG ATCACCCTGA TGCCACTGCC AGGCTTTGAA TTGATTGGTG ATTTATCAGT TAACACGGGT AAGTTTATGC GTGAACTCGC CGAGCGATTA AAGCTGTGGT TACACCCTAA GGCGAATGAT ATCAGCATCC ACCGCCTCGA AGAACCGATG GCGCCTGAGG AAGCGGCGCG TCTCTATGAA TTAGAGCGCT GCGTCGAGTG TGGGGTTTGT GTGTCAGCCT GCGCGACTAA GCAAATGCGT GAAACCTTTG TCGGCGCAGT AGGGATGATG AAAATCGCCC GCTTTGAACT CGATAGCCGC GATGCACGCA CGGCTGAAGA CTTTTACCAT GTGATTGGTA ATCAGGATGG CGTGTTTGGT TGCATGACCT TGCTTGGCTG CCAAGACAAC TGTCCGAAGG ATTTACCCCA TATGCAGCAG ATTGCCTATC TGCGCCGTAA AATGGCGATG ACCTTGGTTT AA
|
Protein sequence | MSQGRQLTFN IFRYDPQEPN DKPKMVRYQL TETPGMTVFI ALNKLREEQD TSLQFDFVCR AGICGSCAMV INGFPTLACR TLTAKYPKGE ITLMPLPGFE LIGDLSVNTG KFMRELAERL KLWLHPKAND ISIHRLEEPM APEEAARLYE LERCVECGVC VSACATKQMR ETFVGAVGMM KIARFELDSR DARTAEDFYH VIGNQDGVFG CMTLLGCQDN CPKDLPHMQQ IAYLRRKMAM TLV
|
| |