Gene Shewmr7_3603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3603 
Symbol 
ID4255022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4283745 
End bp4284638 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content48% 
IMG OID638124287 
Productnicotinate-nucleotide pyrophosphorylase [carboxylating] 
Protein accessionYP_739640 
Protein GI114049090 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0157] Nicotinate-nucleotide pyrophosphorylase 
TIGRFAM ID[TIGR00078] nicotinate-nucleotide pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.48491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAGAGA ACGATATTCG CCACGCCGTA AAAACCGCCC TCAATGAAGA CCTTGGTGGA 
ACCGAGATCA ACGAGCACAG CAAAGCCATT GCCTACGGCG ACATTACCGC CCAACTTATT
CCTGCTGATA AATATGCCGA AGCGACCTTA ATCACTCGCG AAGAAGGTGT TTTTTGTGGA
AAAGCTTGGG CCGAACAAGT CTTCAATCAA TTAGGTGGCG AAGTCGCATT GCACTGGCAT
GTTGATGATG GCGACCTCGT GCTACCAAAC CAAGTGTTAT GTGAACTATC AGGCCCTGCC
CGCACTATCC TTACGGGCGA GCGCACTGCG ATGAACTTTA TTCAGACCTT GTCAGGAGTC
GCGACACTGA CAAAACATTA TGTGGATAAG TTAGCGGGCA CTCACACACG CTTACTCGAT
ACTCGCAAAA CCATCCCAGG ACTTCGCACG GCTCAAAAAT ACGCTGTGAC CTGTGGCGGC
GGTAAAAACC ATCGAATCGG TTTGTTTGAT GCCTTCTTAA TTAAAGAAAA TCACATTATG
GCCTGCGGTG GCATTCGCCA AGCGGTGGAT GCTGCGCGCA GCTTGCACCC CAATAAACCC
GTAGAAGTTG AAGTTGAATC GCTAGAAGAA CTCGCATTAG CGCTAGATTC AGGCACAGAT
ATCATCATGT TAGATAACTT TGACATCACC ATGATGGTTG AAGCCGTCGA AATGAATAAT
CATTACCTTG CAACAGGCAA AGCTAAAGGC AGCGGTGCAA AACTTGAAGT CTCGGGCAAT
GTCACCTTAG ATACCTTGGC AGAATTTGCC AAAACTGGGG TTGACTATAT CTCTGTCGGC
GCACTCACAA AGCACGTTCG AGCCCTCGAT CTCTCACTCA GACTCAAGTC TTAG
 
Protein sequence
MLENDIRHAV KTALNEDLGG TEINEHSKAI AYGDITAQLI PADKYAEATL ITREEGVFCG 
KAWAEQVFNQ LGGEVALHWH VDDGDLVLPN QVLCELSGPA RTILTGERTA MNFIQTLSGV
ATLTKHYVDK LAGTHTRLLD TRKTIPGLRT AQKYAVTCGG GKNHRIGLFD AFLIKENHIM
ACGGIRQAVD AARSLHPNKP VEVEVESLEE LALALDSGTD IIMLDNFDIT MMVEAVEMNN
HYLATGKAKG SGAKLEVSGN VTLDTLAEFA KTGVDYISVG ALTKHVRALD LSLRLKS