| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3597 |
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| Symbol | |
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| ID | 4255016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4274549 |
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| End bp | 4275976 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638124281 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_739634 |
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| Protein GI | 114049084 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000546829 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACG AAATCAAAAC TCAGGTAGTG GTATTAGGTG CAGGTCCTGC GGGATATTCT
GCAGCCTTCC GTGCGGCTGA CTTAGGTCTG GAAACCGTTA TCGTTGAACG TTTTAGCACT
TTAGGTGGCG TGTGTCTGAA CGTGGGTTGT ATCCCATCTA AAGCCCTGTT ACACGTTGCT
AAAGTTATCG AAGAAGCCAA AGCCGTTGCT GCACACGGTG TTGTGTTCGG CGAGCCAACA
ATCGATTTAG ACAAGTTACG CAGCTTCAAG CAAAAAGTGA TCAGCCAGTT GACTGGTGGC
TTAGGCGGCA TGTCTAAAAT GCGTAAAGTA AACGTTGTTA ATGGCTTCGG TAAATTTACT
GGCCCTAACA GCTTAGAAGT GACCGCTGAA GACGGTACTG TGACTGTCGT TAAGTTTGAC
CAAGCGATCA TCGCTGCGGG TTCTCGCCCA ATCAAACTGC CATTCATTCC CCATGAAGAC
CCACGTATTT GGGATTCGAC CGACGCATTA GAACTGAAAG AAGTGCCTGG CAAACTGCTG
GTCATGGGCG GCGGTATCAT CGGTTTAGAA ATGGGTACGG TTTACTCTTC TCTGGGCAGT
GAAATCGATG TGGTTGAAAT GTTCGACCAA GTGATCCCAG CGGCTGACAA AGACGTCGTT
CGCGTATTCA CTAAGCAAAT CAAGAAGAAA TTCAACCTGA TCCTCGAAAC TAAAGTGACC
GCGGTTGAAG CCCGTGAAGA CGGTATCTAC GTATCGATGG AAGGTAAGAG CGCACCAGCA
GAGCCAGTAC GTTACGATGC AGTGTTAGTT GCTATTGGCC GTACGCCAAA TGGCAAGCTG
ATCGACGCTG AAAAAGCGGG CGTTAAGATC GATGAACGTG GTTTCATCAA CGTAGACAAG
CAATTACGTA CAAACGTACC GCACATCTAC GCAATCGGTG ACATCGTTGG TCAACCAATG
TTGGCTCACA AAGGCGTGCA CGAAGGCCAC GTTGCGGCCG AAGTGATCGC GGGTATGAAG
CACTACTTCG ATCCAAAAGT CATCCCATCA ATCGCTTACA CAGACCCTGA AGTGGCCTGG
GTTGGTCTGA CTGAGAAAGA AGCTAAAGAG CAAGGTATTG CTTACGAAAC AGCAACTTTC
CCATGGGCAG CCAGCGGTCG TGCAATCGCT TCAGATTGCA GCGAAGGTAT GACTAAGCTG
ATTTTCGATA AAGACACTCA CCGCGTTATC GGTGGTGCTA TCGTGGGTGT GAACGGTGGC
GAACTGTTAG GCGAAATCGG CCTGGCAATC GAAATGGGTT GTGATGCTGA AGATTTAGCA
TTAACTATCC ACGCTCACCC AACTCTGCAC GAGTCAGTGG GTCTAGCGGC TGAAATCTAC
GAAGGTTCTA TTACTGATCT GCCAAACCCA AAGGCAAAGA AAAAGTAA
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| Protein sequence | MSNEIKTQVV VLGAGPAGYS AAFRAADLGL ETVIVERFST LGGVCLNVGC IPSKALLHVA
KVIEEAKAVA AHGVVFGEPT IDLDKLRSFK QKVISQLTGG LGGMSKMRKV NVVNGFGKFT
GPNSLEVTAE DGTVTVVKFD QAIIAAGSRP IKLPFIPHED PRIWDSTDAL ELKEVPGKLL
VMGGGIIGLE MGTVYSSLGS EIDVVEMFDQ VIPAADKDVV RVFTKQIKKK FNLILETKVT
AVEAREDGIY VSMEGKSAPA EPVRYDAVLV AIGRTPNGKL IDAEKAGVKI DERGFINVDK
QLRTNVPHIY AIGDIVGQPM LAHKGVHEGH VAAEVIAGMK HYFDPKVIPS IAYTDPEVAW
VGLTEKEAKE QGIAYETATF PWAASGRAIA SDCSEGMTKL IFDKDTHRVI GGAIVGVNGG
ELLGEIGLAI EMGCDAEDLA LTIHAHPTLH ESVGLAAEIY EGSITDLPNP KAKKK
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