Gene Shewmr7_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3553 
Symbol 
ID4255859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp4214677 
End bp4215831 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content46% 
IMG OID638124237 
Producthypothetical protein 
Protein accessionYP_739590 
Protein GI114049040 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.462598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAA TCCAACTTAG ACGCCAAGTT AAATACCGCA TTGCCTTTCT GGTACTGATG 
ATTGCGGTAT ATGTCCTAGG CTTTCATTTG CTGCCGGAGC AGCTTACAAA CACGCGCGGA
GCCTTATCCT TAGCCGTAGT GACGGTGCTC TATTTTGTGT TGTTGCCTGT GCTTTATTGG
TATTGGATTA TCAAAATAGG TGCGCAAAAG CCGTGGAAGA TGTTGGTTGT GTTAAGTTTG
AGTAGCCTAA TGGCGAGGCT TAGCTATCCA CATGAAGTGG CTGAGTATTT CGAGTTTATC
GCTTGGCTAC GTTACCCCAT TATTGCAGTA TTACTCATTA TCGAGCTGTA CTTGATAGTA
AGTATTATTA AGGGGTTATG GCAGGCGAGA AAGGCATCTG GGGATCCAAG ATTAGCTATC
GTTGAGCAGT ATGCCGCAAT CGAGCAGTCT GAGCCGAGTG CTGAAGCGGA AAAAATAGAG
TCAATTAATC CCAACAAGCA GTCAGAGTCT GGTTTGCCGC CTAGTGCCGA CGAGAAGAGG
TTAACATTGG GTTTAATCCT CGCCACTGAG CCCGCCAGTT GGTATTACGC CATTCCCTAC
TTTTCCCGTC GCCACCCTGA GGCCATTGGC TCTCTCAACT TGCTCAGCGC TAAGCCTTGG
CATGCTTTGG TTATCACTTT GGGATTAATG GCTAGCTCTG TGCTGAGTTA CAGCTTACTC
GATAGGATAA GTCATATTGC TGCACTATTT GTTTCGGGTT TGCTTTTGTA TTCCATCCTA
TTAATGGCGG CAAATTATCG GATCAGTCGT TATTACTCAC TTTACCAAAG GGCGGATAAG
CTCATCATTA ATAACGGTAT GTGGGGCTTT ATGGCCGTTG ATTTCACACA GATTAGTGAA
CTGAAATTAG GGCGCTTTAG CAGTCCTGTG TCGCAGGCTT CACTGGGTGA CACAACGCCT
AGTGACGCAC CCGAAATCTT GACCCTAGGT CGCGGTGAGG CGAATGCGCA GTTGATATTT
AACCAGCCAC AAGTTTATTA CGGTGCGATG GGGCAATTAC CTGAGTCATT GACCGTTGTG
AACTTAGTCG TCGAGGACCC TCAAGCGTTA GCCGATACTT TAGCCCCAAG TGTTGTGTTA
GATAAGGTAT CGTAG
 
Protein sequence
MLKIQLRRQV KYRIAFLVLM IAVYVLGFHL LPEQLTNTRG ALSLAVVTVL YFVLLPVLYW 
YWIIKIGAQK PWKMLVVLSL SSLMARLSYP HEVAEYFEFI AWLRYPIIAV LLIIELYLIV
SIIKGLWQAR KASGDPRLAI VEQYAAIEQS EPSAEAEKIE SINPNKQSES GLPPSADEKR
LTLGLILATE PASWYYAIPY FSRRHPEAIG SLNLLSAKPW HALVITLGLM ASSVLSYSLL
DRISHIAALF VSGLLLYSIL LMAANYRISR YYSLYQRADK LIINNGMWGF MAVDFTQISE
LKLGRFSSPV SQASLGDTTP SDAPEILTLG RGEANAQLIF NQPQVYYGAM GQLPESLTVV
NLVVEDPQAL ADTLAPSVVL DKVS