| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3509 |
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| Symbol | |
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| ID | 4256255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4156649 |
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| End bp | 4157704 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638124193 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_739546 |
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| Protein GI | 114048996 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAA GTAAGCTCAT CATCGCCGTT CCACTGATAC TCGCCGCTGT TGCGGGGGGC
GGCTATTACT GGTGGACGCA AGTACGTTTT ATCGAAACCA CTGACAACGC CTATGTTGAG
GCAGATATCT CCCATGTGAG TGTGAAGGTC CCGGGTTATG TGGTGTTATC CGATGTGACC
GATAACCAGC ATGTGCGCAA GGGCGAGTTA TTGGCGCAAC TTGAGGATAA CCAGTTTAGC
GCCAAAGTCA GCCAAGCCGA GGCGTCACTC GCCAGTGCTA AGGCCGATCT GCAAACCTTA
GCCGCTAAGG TGGAATTGCA ACATGCGTTG ATCAGCCAAG CGAGTGCGGG CGTAGTCGCA
GCGCAGGCCG ACAAACTGCG CGCCGAGCAA CAGTTAACTC GTGCTAAAAA GTTAAAAGTC
AGCAACTACA GCTCACAGGA CGATGTCGAC CAATTGCAGG CGGGTTTTGA TTCTGCCGCC
GCTGGGCTGG ATGAAGCCAA GGCACTGTTA GTGGCTAAAG AGCGTGAGCT TGCCGTGTTC
AATGCCCAGC TTAATCAAGC TGGCTCTGTG GTTGAACAGT CAAATGCGGC ATTGGAGCTG
GCTAAAATTC AGCTTAATGA TACCCGCGTA ACCGCGCCTT TCTCTGGGGT GATTGGTAAA
CGCGGCGCCA TGGTGGGGCA GTATGTACAG CCCGGCCAGG CACTCTACAG TTTGGTTCCG
GATGGGGCTG TGTGGATCAC GGCGAACTTT AAAGAAACCC AAATCCAACA TATGCAACCT
GGGCAGTCGG TGCAGGTCAG TCTCGATGCG TTTCCCGACA AAACCTTTAC AGGTGTTATC
GATAGTCTGT CGCCGGCGTC CGGAGCCAAA TTTAGTCTGC TGCCCGCCGA AAATGCCACG
GGTAACTTCA CTAAAATAGT GCAACGTATT CCGGTGCGGA TCCGTTTAGA TCTCTCAGAA
GAAGAGGCGC GTGTCGTCCC CGGTTTAAGT GCCGTGGTGA AGGTCGATAC TGCGTCGCAT
CCGACGACAG CCATCGCTGC TAACGTCGGT CGCTAA
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| Protein sequence | MSKSKLIIAV PLILAAVAGG GYYWWTQVRF IETTDNAYVE ADISHVSVKV PGYVVLSDVT
DNQHVRKGEL LAQLEDNQFS AKVSQAEASL ASAKADLQTL AAKVELQHAL ISQASAGVVA
AQADKLRAEQ QLTRAKKLKV SNYSSQDDVD QLQAGFDSAA AGLDEAKALL VAKERELAVF
NAQLNQAGSV VEQSNAALEL AKIQLNDTRV TAPFSGVIGK RGAMVGQYVQ PGQALYSLVP
DGAVWITANF KETQIQHMQP GQSVQVSLDA FPDKTFTGVI DSLSPASGAK FSLLPAENAT
GNFTKIVQRI PVRIRLDLSE EEARVVPGLS AVVKVDTASH PTTAIAANVG R
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