| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3418 |
|---|
| Symbol | |
|---|
| ID | 4254684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 4051741 |
|---|
| End bp | 4052760 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638124099 |
|---|
| Product | arginine succinyltransferase |
|---|
| Protein accession | YP_739456 |
|---|
| Protein GI | 114048906 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3138] Arginine/ornithine N-succinyltransferase beta subunit |
|---|
| TIGRFAM ID | [TIGR03243] arginine and ornithine succinyltransferase subunits
[TIGR03244] arginine N-succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0994163 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATCA TACGTCCTAT TCAGGCAGGC GATTTTGAAT CTCTATATCA AATCGCCGAA
GAATCTGGCC ATGGCTTTAC CTCATTGCCA GTCAATGCCG ATTTGCTAAG GCATAAAATT
GCCCGCGCAG AAGCCTCATT CGTTAAGGTG ATTGATAAGC CCTTCGATGA AGGCTATTTG
ATGGTGCTCG AGGATACCGC GACTCGTGAA GTGGTCGGGA CCTGTGCCAT TGAAGCCGCC
GTGGGTATGG AAGATGCCTT CTACCACTAC CGCCTCGGGA CCGAGGTCTA TCATTCTGAA
CAAATCGAAG TTCGCAACGA GGTGGAAACC TTAACCCTGT GCCACGATTA CACTGGCGCC
GCCGAACTTT GTACCCTGTT TTTGCGTGAG GGTTATCGCA AAGGGAATAA TGGTCGGATG
TTGTCGCGCA GCCGTTTTCT GTTTTTGGCA CAGCACGCTA AACGCTTTGG TGAGACAGTG
ATTGCCGAAA TGCGTGGCGT GAGCGATTCC CATGGCAATT CTCCCTTCTA CTGCTGGTTA
CAGAAAAACT TCTTAGGCAT TGATTTTATT CAGGCAGATT ACCTGTCGGG TCTAGGCAAA
AAAGCCTTTA TGGCGGAGAT GATGCCCCGC AACCCTGTGT ATGTTTGCCT GCTGCCTGAA
GAAGCGCAAA AAGTGATTGG CGAAGTACAC ACCAATACGC GTCCTGCCTT GAGTCTGTTG
CAGGCGGAAG GCTTTAGATG CCGTGGTTAT GTGGATATTT TCGATGGCGG TCCAACGGTG
GAATGCCGTC TCACCGATAT CCGCGCCGTG CGAGAGAGCC GTCTGCTGAC CGTAGATATT
GGTGAAATGC CTGAATCCGA TAAGCAATTT ATTGTCTCTA ACACTCAATT AGCCAATTAC
CGTGCGACCT CCGCTTGTCT TGCTGTCGAT GACAAAACTG AGCAGGTGGT AATTAGTCCA
GAACTCGCCG AGGGTTTGTT ACTCGCAAAA GGCGATCAAA TCCGTATTTT GGCAATGTAG
|
|---|
| Protein sequence | MLIIRPIQAG DFESLYQIAE ESGHGFTSLP VNADLLRHKI ARAEASFVKV IDKPFDEGYL
MVLEDTATRE VVGTCAIEAA VGMEDAFYHY RLGTEVYHSE QIEVRNEVET LTLCHDYTGA
AELCTLFLRE GYRKGNNGRM LSRSRFLFLA QHAKRFGETV IAEMRGVSDS HGNSPFYCWL
QKNFLGIDFI QADYLSGLGK KAFMAEMMPR NPVYVCLLPE EAQKVIGEVH TNTRPALSLL
QAEGFRCRGY VDIFDGGPTV ECRLTDIRAV RESRLLTVDI GEMPESDKQF IVSNTQLANY
RATSACLAVD DKTEQVVISP ELAEGLLLAK GDQIRILAM
|
|---|
| |