| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3383 |
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| Symbol | |
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| ID | 4257474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 4004665 |
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| End bp | 4005699 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638124065 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_739422 |
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| Protein GI | 114048872 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0237122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCTA AAACTGCGAA AAAAAATGTG ACTGTCATCG ATGTAGCCGA GGTGGCCGGA
GTATCAAAGT CGACAGTATC TCTGGTGCTG CAGGGCAGCG ATAAAGTCAA CCCCGCTACA
CGTGACAAGG TGCAGATGGC CATGGGTAAA CTTGGGTACG TTTACAACCG CGAGGCGGCG
TCGCTCAGGG GCAAACGCTC CAACCTAGTT GCTATTGTAA TCAATGACTT GACCAACCCC
TACTCGGCGC AACTTGCCGT GGGACTTGAG GCCAATATCC GCCGCATGGG GCTTTTTTCA
ATGCTGGTTA ACTCCGGGGA AGATAAGGAC ACCCAAAGCC AGCTGGTGCA GAGCCTGAAA
GAATATAACG TTGCCGCCTT TGTGATTTGT CCAGCCCCCG GAACCGATCC TGAGTGGGTC
AATAGGTTAG CGAGCAGCGT GCCGGTTATC CATATAATGC GTGAGGTCGA AGGGGCGGCA
GTTCCTACAG TACTGCCCGA TAACCAGGGC GGCACTCTGG CTGCCACCCG CCATTTGATT
ACGCAGGGGT ATCGGTGTAT TGGCTTTTTG GGTGGAAATA AGCGTATTTC AGACTACGGC
GAACGTCTGG CTGGTTTCAA AGAGGCACTG GCAGAAGCCG GACTCGAACC TGCGGGTATA
TGGGAGACGG CGCTCACCAA TCGACATGGC GGCCGGGTTG CCATGGCCGA GTTGCTTGAG
TCTATACAAC GCCCTGAGGC GCTGGTGTGT TTTACCGATA TTATCGCCTA CGGTGCCATT
GAACAGCTCA GACAGCAGGG GCTTAAGCCC GGCGAAGATA TGGCGATTAT TGGATTTGAC
GATTTGGAAG ATTCGAGCCT GATGACACCA GCGTTGTCTT CTATCGCCAT TGACGCCGAT
GCGGTCGGTG CCACCGTGTG CGGTGTGCTG GATAACATCC GTAAGGGGCT GCAGGAACAA
GGCTTACAGC GCTTGCCTGT GCAGCTTAAG GTGCGGGGCT CAAGCCCTCT CTACACACGA
AATAACCGTT TGTAA
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| Protein sequence | MRAKTAKKNV TVIDVAEVAG VSKSTVSLVL QGSDKVNPAT RDKVQMAMGK LGYVYNREAA
SLRGKRSNLV AIVINDLTNP YSAQLAVGLE ANIRRMGLFS MLVNSGEDKD TQSQLVQSLK
EYNVAAFVIC PAPGTDPEWV NRLASSVPVI HIMREVEGAA VPTVLPDNQG GTLAATRHLI
TQGYRCIGFL GGNKRISDYG ERLAGFKEAL AEAGLEPAGI WETALTNRHG GRVAMAELLE
SIQRPEALVC FTDIIAYGAI EQLRQQGLKP GEDMAIIGFD DLEDSSLMTP ALSSIAIDAD
AVGATVCGVL DNIRKGLQEQ GLQRLPVQLK VRGSSPLYTR NNRL
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