Gene Shewmr7_3370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3370 
Symbol 
ID4257461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3985636 
End bp3986070 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content48% 
IMG OID638124052 
Producthypothetical protein 
Protein accessionYP_739409 
Protein GI114048859 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00382393 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00694249 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAACA TGACTCAAGA TTTGTGGCAG CATTACCAGA AGCCGTTGTT TTTGCTTACT 
CAAGCATTAT CCTGTGATTT TTCCTTTGCT GTAATTACCG CCCATAATCC CGCTTCAACC
CTCCTCAGTC CCAGCCAAAA CCGCTTACTC GACCGCCAAC TTCTCCGTGA TATTGAATTA
ATCGGCAGCC CCTATCGTGC AATGGTGGGC GCATCGCCAG ATTTATCCCA TATGGAAAAG
AGCTGGGCGG TGTTTGTCGA TAGAAGCATG GCGCTGCAGT TGGGGAAAAA GTTTAATCAA
TACGCCATCT ACATGGTGGA AAAGGGTGAG GTGAGTTTAG TGCCTTGCAC CATCACTGGG
CATGATGAAG TGTGTTTAGG CCTGTTTAAT GATCACGTGC GTTTGGTTTA CGAACTGCCG
GATCTAGCGA CCTAA
 
Protein sequence
MDNMTQDLWQ HYQKPLFLLT QALSCDFSFA VITAHNPAST LLSPSQNRLL DRQLLRDIEL 
IGSPYRAMVG ASPDLSHMEK SWAVFVDRSM ALQLGKKFNQ YAIYMVEKGE VSLVPCTITG
HDEVCLGLFN DHVRLVYELP DLAT