Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3368 |
Symbol | |
ID | 4257459 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3982604 |
End bp | 3983719 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638124050 |
Product | succinylglutamate desuccinylase/aspartoacylase |
Protein accession | YP_739407 |
Protein GI | 114048857 |
COG category | [R] General function prediction only |
COG ID | [COG3608] Predicted deacylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0136017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0263017 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCGA CTGCGTCGTC TTTAACCATC GGGGAGCTTG CCGCAGGGCA AGCACTCACT CTGCCGATTT ACCATTTTAA GCCAAGTGGT CATGTTTCTG GCCCCAAAGT GTATATTCAG GCCAATGTCC ACGGCGCTGA GGTGCAGGGG AATGCGGTGA TTTTCCAATT GATGAAGCAG CTTGAGCGCT GCGACATCTT AGGGGAAATT ACCTTAGTGC CCTTGGCAAA TCCGCTGGGG ATAAATCAAA AGAGTGGTGA GTTTACGCTG GGGCGTTTTG ACCCTATCAC AGGGGCAAAC TGGAACCGCG AGTACTTAAA TCACTCGATT GATTTACCCG CTTGGTACCG TGAACATGCC GAGCTTAGGG ACAGTGCGCT TATCCAAGCT TACCGCAGCA CCTTAGTCGA GGCGTGTCAG CAGCGTTTAC GCAACGAGTG GGGTGTGACC ACGGGCCACA GATTAGCGGT TAACCTGCAG GCCATGGCCC ACGAGGCGGA TATAGTACTC GATCTGCATA CTGGGCCTAA ATCCTGTAAA CACTTATATT GCCCTGAATA TGACCTTGCG GCGGCGCAGT TTTTCTCGAT TCCTTACACC TTAGTGATCC CCAATAGTTT TGGCGGGGCT ATGGATGAAG CGGCATTTTG CCCTTGGTGG CAATTGAGTG AAGTCGCTAA AGTACAGGGG CGAGAACTCG AGATTGCCGT TTCGGCCTTT ACCTTGGAAC TGGCGAGCCA AGAACGCATT TGCCTTGAGG ATGCTTTAGT CGATGCTCAG GGGATTTTGG CCTACTTGAG TCATCGTGGG GTGATCGCCG AGCGAGTCGC ACCCGCAAAG ATGCCGCGTT TTGGCTGTTA TCTTAAGGAT TACAAAAAGT ACCATGCGCC CATGGCGGGA TTGGTGGAAT ATGTGGCGCC CGTGGGAGAG CCACTGGCGG CGGGTGAGAC CTTAGTCAAT CTGCTGCGGC TCGACTTATA TGGCAGTGAG CAGGAGCTGA CGGCGCTAAG CTTGCCGCAG GATTGTGTGC CCATACTCCA TTTTGCCTCG GCGTCAGTGC ATCAAGGCAC AGAGCTTTAT AAAGTCATGA CGAATCTGTT TGAGTTGACA CAGTAA
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Protein sequence | MQPTASSLTI GELAAGQALT LPIYHFKPSG HVSGPKVYIQ ANVHGAEVQG NAVIFQLMKQ LERCDILGEI TLVPLANPLG INQKSGEFTL GRFDPITGAN WNREYLNHSI DLPAWYREHA ELRDSALIQA YRSTLVEACQ QRLRNEWGVT TGHRLAVNLQ AMAHEADIVL DLHTGPKSCK HLYCPEYDLA AAQFFSIPYT LVIPNSFGGA MDEAAFCPWW QLSEVAKVQG RELEIAVSAF TLELASQERI CLEDALVDAQ GILAYLSHRG VIAERVAPAK MPRFGCYLKD YKKYHAPMAG LVEYVAPVGE PLAAGETLVN LLRLDLYGSE QELTALSLPQ DCVPILHFAS ASVHQGTELY KVMTNLFELT Q
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