| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3326 |
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| Symbol | |
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| ID | 4255195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3937786 |
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| End bp | 3942339 |
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| Gene Length | 4554 bp |
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| Protein Length | 1517 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638124008 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding protein |
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| Protein accession | YP_739365 |
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| Protein GI | 114048815 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0316615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA ATAATCAGCC CACACACATG ACTCAAGCCC AAACGCCCGA TCCGCTTTTT
TTACAAGCCG AGCATTTGGC AAAAGATTTT TCTCTGTTTC CTAAACACAG TAAACAGAGC
TTATCAGATG AAATTAAAGG TCTTTTAAAC GATGACGCCA TTCAGGCAAA TTTAAAGGAC
TTGGCATCTT TAGATGTCGA TGGTTACGTC GCAAAAGTGA TCCAGCCGAC CCAAGATAAA
GGTCGTCCTA GTGCAAAACG TATCATTGCT GACCTAAAAG GTCGCTTGAT TACCGAAACT
CACTTGGGTT CTTTCTACAG TGCTGAGGTC GAGCTGAATT TCGGTTCACA CACTCGTCGT
ATCGGTTTTA TTGCCCAAGA GCGTACTACG GCTAACGGCG CGTGGATGCC TGAGCATCAC
TACGCGGCCT GTAAAGCGAT TCGTCATTTT GCCGAATTGT CTATGCCTAT CGTTTACCTC
ATCGACACCC CTGGGGCCGA TGCGGGCGAA GTGGCCAACA GCCAAAACCA AGCACATTCT
ATTTCTAAGG CGATCGCTGA GAGTGCCAAC GTTGACGTGC CAACAGTCGG TATCGTTATC
GGTGCGGGTT ACTCGGGCGG TGCGATTCCA TTAGCGGCGG CCAACATCCT GTTATCGCTG
CGCGATGGTA TTTTCAACAC GATTCAGCCA CAAGGTCTGC AGAGTATTGC GCGTAAGTAC
AACCTGTCAT GGCAGGAATG TGCTAAGTCT GTGGGCGTGT CTCCAGAAGA GCTATATACC
GCGGGTTGTA TCGATGGCAT CATCGATTTC TCTCCAGGTG ACCGTGACGA GCGTCAGCAC
AACTTACGCC GCGCTATTAT CAGCAGTATC GAAGCTGTTG AACGTGCAGC CATCAACTTT
GTGCGTGAAT CTAAAGATTT ACGTGAGCAT TATGACCGCA GTTTAGCGCG CTTCCTCAGC
CCATCTAAGA ACCTGATGGC GTTAGAGTTA AACGCGGAAT TGGCAGTGGC AACTAGCCCA
ACCAACCACC ACAACCTGTT TGGTAGTGCT TACCGTTACC TACGTTATTT AACGCTGCGT
AGCCGCATTC ATTCAATCTC TCAGGAGCAA TACGGACGTC TGTCACGTGT TAGCGTGCCT
GAAGGTGACT TATTAGCTCG TATCCAGCAA GAGCAAGACC GTGTATTCCA AGCTTGGTTA
TCAAGCCCAG ATAAGCTGGT TTACGATGAA GATCTAAACA AGCTGTGGGC GAACTTTATT
GCTAAGCGCG ATGAAGTGTC TACCGAGCGT AACATGCTGA CTCGTTTGAT TTTGGGTGAA
CCAAAAGAGA ACTACAAAAA AGCACGCAAG GCGCTGCTAT TTAACATCGG TTGGTCTTTA
TATCACCGCT GGAAGAGCAA CGCGGCAAAC AACTTCAAGG GCTTAATCCA GCACCTTGAA
AATCTGCCAA AATCAGTGAC TCAAGCCAAG TGGCCTGAGC TGAATCAACT GACTGTGCTC
GATGTGGTTG TGAACGACGA ACTACGTGAA GACTTCATTT GGCAATGTCA TAACATCCTG
ATCTTTAACT CACTGTACGA CAACGTTGTG GGCAGCTTAG CGTCTATCGC GAAAGAAGCC
ATGATGTCTA AGAGCCTGTC TCGTAACTCA GTGAACAACC TGCTGCACAA GTCAATTGAC
CATGCGCTGT CGACTCAGGA TACCGCTAAC GACAAGGCGA AATTCTACAA GTGGCTTAAG
TACTTTATGG GCCAATCTAA CCGTGCCGAT CTCTTGGTGC GTGTAGAGCA GTGGAAGAGT
GTGGGCTTCC CACAACTTAA CGACAGTCTA TTCGTTATTC TGACTTACTT CTTCGAGCGT
TTACTACCTG AATACTTCGA CAGTGAAAGC GATAACAGCA AGTACACTGG CGCGATTAAC
CCTGTGCGTA TTGGTCGTCG TAAGGACTTC TGGAACCGCT TGACCATGGG TTATCAGGAC
TTACTGATCC AAAAAGTCTT ACGTGACGAA AAACGTACTG GCAAGATGAC CTGGGAAAAT
GTGATTAAGC AATTCTTCAC TCATTTTGAA GAGATCAATG GCGATAAGAT GTCGGCCAAC
TTGCTTAACT TCCCTGGTTT CCGCCTCTCA ATCGAAGATG CGTTAGACAA AGGCATTCGC
CCTTGCGGTC TGATCACAGG TATTGCTGAC TTTAAAGAAA AAGGTCAAAA AGTCCGTGTG
GGTGTAGCTG TGTCTAACAC TGCATTCCAA GCGGGTGCCT TCGATATGGC GAGTGCTGAG
AAATTCTCTG CGCTGCTGAT CGAGTGTGCT AAGCGTAAGC TACCTGTTGT TTGCTTTATC
AGCTCAGGCG GTATGCAAAC TAAAGAAGGT GCTGCGGCAC TGTTCTCAAT GGCTGTTGTG
AACGACCGTA TTACTCGTTT CATCCGTGAT AACGAATTGC CAGTACTGAT GTTTGGTTTT
GGTGACTGTA CCGGTGGTGC GCAGGCGAGT TTCGTGACTC ATCCATTAGT GCAAACCTAT
TACCTGTCTG GTACTAACAT GCCATTCGCG GGTCAAATGG TGGTTCCAGC TTACTTGCCT
TCGACTTCGA CACTGTCTAA CTACTTGTCG AAAGTACCAG GTGCAATGGC GGGCCTAGTC
CACAACCCAT TCAGCGAAAC CTTAGATAAC CAATTGGCGA GCATCGATCC GCTGATGCCA
ATGCCAACGG CGAAGATCAA TGACGTGATC ATCAACGCCC TATCAACACT GGTTGTTGAA
GCGCCTGTTG AAGAAGAAGT GATTGTTCAA AACGATCCGC GTAAGTTAAT GAAACCAATT
AACAAAGTAT TGGTTCATGC CCGTGGTTGT ACCGCTGTTA AGTTGATCCG TAAGGCTCAC
GATAACGACA TCAACGTGGT ATTAGTGGCG TCAGATCCTG ACATGACCGC CGTACCTGCG
GATATGCTGA AAGACTCAGA CAAGTTAGTC TGCTTAGGTG GTAACACCTC TGACGAAAGT
TACCTGAACG CTTACTCAGT GCTCAAAGTT GCCGAATACG AGCAAGTTGA TGCACTGCAC
CCAGGTATCG GCTTCCTGTC TGAAAGCCCA CAGTTTGCGG CATTGTGTGT GAACAATGGG
GTTAACTTCG TTGGTCCTAG CGTGCATTCA ATGACGACTA TGGGTAACAA ATCGAACGCG
ATTAAGACGT CACAAAGCCA AAACGTGCCA GTAGTACCAG GTTCACACGG TATTCTGACG
AACGCTGAGC AAGCGGTGAA TGTGGCCAAC GAAATTGGTT ACCCAGTACT GCTCAAAGCG
GTACAAGGCG GTGGCGGTAA AGGTATTCAG GTCGTTAAAC GCCCTGAGGA TATGATTGGT
TTATTCCAAA AGACCTCTAC CGAAGCGGCT GCGGCCTTTG GTAACGGCGA CTTGTACTTA
GAGAAATATG TAACGTCACT GCGTCATATC GAAGTGCAGT TACTGCGTGA CAAGTTTGGT
AACGCTAAGG TTCTGGGTTT ACGTGACTGT TCTGTACAAC GTAACAACCA GAAAGTGGTC
GAAGAGTCTG GCTCAACCAT GCTGCCAGAA GAACTGAAGA AACAAGTGCT GGATTACACC
CGTGCTTTAG GTGATGCGAC CGATTACATG GGCGCAGGTA CTGTTGAGTT CATCTATAAC
TTAGATGCCA ACGAAGTGTA CTTCATGGAA ATGAACACCC GTCTGCAGGT AGAGCATCCA
GTTACTGAAG CGACTTCGGG TATCGATATC GTGAGCGCGC AGTTTGATAT CGCTGCGGGT
CGTTCAATCG AGAACCTAGA GCCGAAAGAA ATTGGTTATG CAATGGAAGT GCGTGTGACT
GCAGAAAAAG CAGCACTGGA CAGCCATGGT GTACTGCAAC TGATCCCAAA TCCAGGCAAG
ATCACCGAAT GTGTATTCCC TGATCATCCA GATGTGGAAA TCATCTCGAT TGCCGCCGCG
GGTAAAGAAG TATCACCATA CTACGACAGC TTAATCGCTC AGGTGATTAT GCGCGGTGAA
AACCGTGAAG ACGTTATCGC GAAACTGCAC GCTTACTTAG ACAGCGTAGT GCTCAAAGGC
ATCGCGACTA ACATTCCATT GCTGAAACTG ATCCTAAGCG ATGGCACCTT CAAAGAAGGC
GTATATGACA CTAACTACCT GCCACGTTTC ATGGCTGAGC TCGACATTCC AGCGCTGATC
GCTGAAATGG AAGCCGCTGC TGAAACCGTG GGTGTAGACA CTGAGTCACT GCGTGTCGGT
GAAAGTAACG AACTGAAAGT ATTAGCCCAA GGCGCAGGTA TCTTCTATAC CTCTCCAGCC
CCTGGCGAAC CTGACTTCGT GAAAGAAGGC GATATTGTTA CTGCAGATCA AACGCTTGCG
TTAACTGAAG CGATGAAGAT GTTCTCTCAG GTCAACTTAG CCGGCTTCAA CCGTCAAGGT
GCTGTGCTGT ACCCTGAAGA TAAGAAGTAC CGCATCGAGC GTATTCTGAA CAGCAATGGT
CAGCAAGTAT CGCAAGGTGA CTTACTCTTC GTGGTATCGC CAGTAGAAGA TTAA
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| Protein sequence | MTSNNQPTHM TQAQTPDPLF LQAEHLAKDF SLFPKHSKQS LSDEIKGLLN DDAIQANLKD
LASLDVDGYV AKVIQPTQDK GRPSAKRIIA DLKGRLITET HLGSFYSAEV ELNFGSHTRR
IGFIAQERTT ANGAWMPEHH YAACKAIRHF AELSMPIVYL IDTPGADAGE VANSQNQAHS
ISKAIAESAN VDVPTVGIVI GAGYSGGAIP LAAANILLSL RDGIFNTIQP QGLQSIARKY
NLSWQECAKS VGVSPEELYT AGCIDGIIDF SPGDRDERQH NLRRAIISSI EAVERAAINF
VRESKDLREH YDRSLARFLS PSKNLMALEL NAELAVATSP TNHHNLFGSA YRYLRYLTLR
SRIHSISQEQ YGRLSRVSVP EGDLLARIQQ EQDRVFQAWL SSPDKLVYDE DLNKLWANFI
AKRDEVSTER NMLTRLILGE PKENYKKARK ALLFNIGWSL YHRWKSNAAN NFKGLIQHLE
NLPKSVTQAK WPELNQLTVL DVVVNDELRE DFIWQCHNIL IFNSLYDNVV GSLASIAKEA
MMSKSLSRNS VNNLLHKSID HALSTQDTAN DKAKFYKWLK YFMGQSNRAD LLVRVEQWKS
VGFPQLNDSL FVILTYFFER LLPEYFDSES DNSKYTGAIN PVRIGRRKDF WNRLTMGYQD
LLIQKVLRDE KRTGKMTWEN VIKQFFTHFE EINGDKMSAN LLNFPGFRLS IEDALDKGIR
PCGLITGIAD FKEKGQKVRV GVAVSNTAFQ AGAFDMASAE KFSALLIECA KRKLPVVCFI
SSGGMQTKEG AAALFSMAVV NDRITRFIRD NELPVLMFGF GDCTGGAQAS FVTHPLVQTY
YLSGTNMPFA GQMVVPAYLP STSTLSNYLS KVPGAMAGLV HNPFSETLDN QLASIDPLMP
MPTAKINDVI INALSTLVVE APVEEEVIVQ NDPRKLMKPI NKVLVHARGC TAVKLIRKAH
DNDINVVLVA SDPDMTAVPA DMLKDSDKLV CLGGNTSDES YLNAYSVLKV AEYEQVDALH
PGIGFLSESP QFAALCVNNG VNFVGPSVHS MTTMGNKSNA IKTSQSQNVP VVPGSHGILT
NAEQAVNVAN EIGYPVLLKA VQGGGGKGIQ VVKRPEDMIG LFQKTSTEAA AAFGNGDLYL
EKYVTSLRHI EVQLLRDKFG NAKVLGLRDC SVQRNNQKVV EESGSTMLPE ELKKQVLDYT
RALGDATDYM GAGTVEFIYN LDANEVYFME MNTRLQVEHP VTEATSGIDI VSAQFDIAAG
RSIENLEPKE IGYAMEVRVT AEKAALDSHG VLQLIPNPGK ITECVFPDHP DVEIISIAAA
GKEVSPYYDS LIAQVIMRGE NREDVIAKLH AYLDSVVLKG IATNIPLLKL ILSDGTFKEG
VYDTNYLPRF MAELDIPALI AEMEAAAETV GVDTESLRVG ESNELKVLAQ GAGIFYTSPA
PGEPDFVKEG DIVTADQTLA LTEAMKMFSQ VNLAGFNRQG AVLYPEDKKY RIERILNSNG
QQVSQGDLLF VVSPVED
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