| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3315 |
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| Symbol | |
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| ID | 4255184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3924705 |
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| End bp | 3925247 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638123997 |
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| Product | prepilin-type cleavage/methylation-like protein |
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| Protein accession | YP_739354 |
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| Protein GI | 114048804 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTAA GCGCGAAAAA ACAGCAAGCG GGCTTTAGCT TATCTGAGCT AATGATCGCT
ATGGTGCTTG GGCTGATTAT TATGCTGGCC GTGGTCAATT TTTTCGCCCC GCTCAAGGCC
ACGGTTGCAG AAAGTAAACG CCTCGAAGAC GCGGCCGATG CGCTAAGATA CGCCACCCTC
AGCCTTAGCA AGAGCGTTAA ACGTGCCTCA AATATTGTAT CCCTCAGCGC TAACGAATTA
GTGCTAGCGG TTGCAGCATC CCCAGCCCAG CCGAGTTTAA CTTGCCTAGG AACCAGCAAA
ACCAGCGATT ACAACGAAAC CTACCGTTTT GACGCCCCCA ATCTAAGCTG CGACGACGGC
GATGGCGCCC AGGTGTTACT CACAGGGCTA GAATCGACCC GTTTTGCACT TAATGGCGAA
CTGGTGACTG TAGTACTCAA GCCCGAAAAA CTCCCCGCGC AATATGGCCA AGGGATCCAG
CTCGATATCG CCCTGCGTAA GCCCCTATGG CAACAAGCCC TCAACAGCCA ACAGAACCCA
TAA
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| Protein sequence | MSLSAKKQQA GFSLSELMIA MVLGLIIMLA VVNFFAPLKA TVAESKRLED AADALRYATL
SLSKSVKRAS NIVSLSANEL VLAVAASPAQ PSLTCLGTSK TSDYNETYRF DAPNLSCDDG
DGAQVLLTGL ESTRFALNGE LVTVVLKPEK LPAQYGQGIQ LDIALRKPLW QQALNSQQNP
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