| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3240 |
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| Symbol | |
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| ID | 4255741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3841342 |
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| End bp | 3842085 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638123923 |
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| Product | lysine decarboxylase transcriptional regulator, CadC |
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| Protein accession | YP_739280 |
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| Protein GI | 114048730 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGTGG GGGGCTGTTG GTTTGACCGT GAGCGTGGCT TACTTGTCGA ACAGGCTCGT
GATGAATCTT GGCACCTTCC CCGTGCCGAG TTGCAAGTGT TGAGCCTGTT GGTTGAACAT
CAAGGCAAAC TGGTCTCCAA GCATGAGCTG AAGACTGGCG ATGGGGCGCA TCCTCCTCTT
ACTGACACTT CGTTAGCGCG GGCGGTCTTT ATGATCCGCT CCTTCCTCGG GCCCCAATAT
GAGGGGCTGA TTGAAACCGT CAAAGGTCAG GGCTATCTGC TGCACTGCAC CCAAGGACAA
AGGTTTAAAA GCTTACGTTA CCCTAGGCTG CAATCCTTAC CTTGGTGGAG TGTGTTGTTG
GTTTTTGGAT TTATGCTTGC GGTTTCAGGC TTTTACCTTA GCCGAATCGA CCACAGTGTT
CCGACTCAAC CTTTGCTCTC TACCGATTTG CCCTTAGCCT CGGGACAACA TATTCGACTG
CATTTGTATG CCAATTCGAA AACCAACAAT ACCCTATTGT TTGAGTTAGG CGACCGCTTG
GGCCAAGGGC TGAGTCGCTG CGGCCACAGT GATTGGTCCG AAGTGTACTC CTCGCTCTCC
CACGATAAAC AGGTGCTCAA CATTACTATG CGGGGTTATA AACTCGGGCA ATCGGTGATC
CGCAACTTGA AGATCAGCGA CTTTAGACGG CCGAAGGAAT TTATTGATGC AAACTGGCTG
CAGGAGGTCG GGATCTGTGG CTAA
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| Protein sequence | MQVGGCWFDR ERGLLVEQAR DESWHLPRAE LQVLSLLVEH QGKLVSKHEL KTGDGAHPPL
TDTSLARAVF MIRSFLGPQY EGLIETVKGQ GYLLHCTQGQ RFKSLRYPRL QSLPWWSVLL
VFGFMLAVSG FYLSRIDHSV PTQPLLSTDL PLASGQHIRL HLYANSKTNN TLLFELGDRL
GQGLSRCGHS DWSEVYSSLS HDKQVLNITM RGYKLGQSVI RNLKISDFRR PKEFIDANWL
QEVGICG
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