Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3219 |
Symbol | |
ID | 4254976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3812385 |
End bp | 3812930 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123903 |
Product | hypothetical protein |
Protein accession | YP_739260 |
Protein GI | 114048710 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAATC AAATCCTGCT TGCCTGTATT TATCTTGCGG TGTTTCTCTT TTTGCAGCGT GCCTTAACTC AATGGGTGAA AAAACTCTCA TTGATGAAGC AGGTGAGTGC CGCCCGTACC AGCCTTGTCA CTCGGTTTAT TTCCTATGTG ATGTTTTTTA TCACTTTGTC TTTGATGGCG GTATCCCTCG GCTTGGGTTA TCAGGACGTG TCGCTGTTTG TCTCCTCCGC GTTTGCGGTG ATGGGCGTCG CCTTAGTCGC TCAGTGGTCG ATACTGAGTA ATTTAACCGC TGGTGTGCTG ATTTTCTTTG TGTTCCCGTA TCGGATTGGT GAACGTATTC GGGTGGTGGA TAAGGATGAA GATATCAGCG GAGTGATTAT TGAAATCGCG CTGTTTCATG TGCTTATCCT TAGGGATAAT GGCGATACCA TCACTTATCC CAACAATTTA ATGCTGCAGA AGGCGGTGTT AAAGCTGGCG GATCAGGCGC CGCTTGCCGA GCGTCAGGCG TTGCAGGAGG GTAAAAAGCG CTTTGATCTT GAGTAG
|
Protein sequence | MTNQILLACI YLAVFLFLQR ALTQWVKKLS LMKQVSAART SLVTRFISYV MFFITLSLMA VSLGLGYQDV SLFVSSAFAV MGVALVAQWS ILSNLTAGVL IFFVFPYRIG ERIRVVDKDE DISGVIIEIA LFHVLILRDN GDTITYPNNL MLQKAVLKLA DQAPLAERQA LQEGKKRFDL E
|
| |