Gene Shewmr7_3219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3219 
Symbol 
ID4254976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3812385 
End bp3812930 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content48% 
IMG OID638123903 
Producthypothetical protein 
Protein accessionYP_739260 
Protein GI114048710 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATC AAATCCTGCT TGCCTGTATT TATCTTGCGG TGTTTCTCTT TTTGCAGCGT 
GCCTTAACTC AATGGGTGAA AAAACTCTCA TTGATGAAGC AGGTGAGTGC CGCCCGTACC
AGCCTTGTCA CTCGGTTTAT TTCCTATGTG ATGTTTTTTA TCACTTTGTC TTTGATGGCG
GTATCCCTCG GCTTGGGTTA TCAGGACGTG TCGCTGTTTG TCTCCTCCGC GTTTGCGGTG
ATGGGCGTCG CCTTAGTCGC TCAGTGGTCG ATACTGAGTA ATTTAACCGC TGGTGTGCTG
ATTTTCTTTG TGTTCCCGTA TCGGATTGGT GAACGTATTC GGGTGGTGGA TAAGGATGAA
GATATCAGCG GAGTGATTAT TGAAATCGCG CTGTTTCATG TGCTTATCCT TAGGGATAAT
GGCGATACCA TCACTTATCC CAACAATTTA ATGCTGCAGA AGGCGGTGTT AAAGCTGGCG
GATCAGGCGC CGCTTGCCGA GCGTCAGGCG TTGCAGGAGG GTAAAAAGCG CTTTGATCTT
GAGTAG
 
Protein sequence
MTNQILLACI YLAVFLFLQR ALTQWVKKLS LMKQVSAART SLVTRFISYV MFFITLSLMA 
VSLGLGYQDV SLFVSSAFAV MGVALVAQWS ILSNLTAGVL IFFVFPYRIG ERIRVVDKDE
DISGVIIEIA LFHVLILRDN GDTITYPNNL MLQKAVLKLA DQAPLAERQA LQEGKKRFDL
E