Gene Shewmr7_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3213 
Symbol 
ID4254970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3806227 
End bp3806751 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content49% 
IMG OID638123897 
Productmethyltransferase type 12 
Protein accessionYP_739254 
Protein GI114048704 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.77577 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACACG CTACACTCAG CACGGCCTCG AGCTTAATTA CCCAGTTTTC ATGGCCTGAG 
CTTACAGGGC TTAAGGTATT GGATTTAGCC TGCGGTTCAG GCCGAAATGG TCTGTGGTTT
CTCTCCCAAG GTTGTGAAGT GACCTTTATC GACCAGGATT TGAGTGCCTT GGCCGAGCTG
AGACACGACA AAGCACATCA ATGGCAGTGG AATTTAGAAG ACGGCAGCGC GCCTCAGTTA
CCCCAAGAGT CCTTTGATAT TGTATTAGTC TTTAATTACT TGCATCGACC ACTGTTCCCG
CAAATCGCTG CGAGCCTAAA GTCCGGCGGA CTGATTGTGT ATGAGACCTT TACTTGGCAA
CAGGCGCAAA TTGGTCGACC TCGCAACCCT GATTTTTTAC TCACAGAGAA CGAACTGCAA
TCCGTATTTG CTAACTGGCA ACCTTTGCAT TACTTTGAAG GTCGGTTAAG CGATGCTGCT
GGTGCTGAAA GTGCCAAGGC GCAGCTGATC GCACGAAAAC CCTAG
 
Protein sequence
MTHATLSTAS SLITQFSWPE LTGLKVLDLA CGSGRNGLWF LSQGCEVTFI DQDLSALAEL 
RHDKAHQWQW NLEDGSAPQL PQESFDIVLV FNYLHRPLFP QIAASLKSGG LIVYETFTWQ
QAQIGRPRNP DFLLTENELQ SVFANWQPLH YFEGRLSDAA GAESAKAQLI ARKP