Gene Shewmr7_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3173 
Symbol 
ID4256971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3748396 
End bp3748779 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content50% 
IMG OID638123857 
Producthypothetical protein 
Protein accessionYP_739214 
Protein GI114048664 
COG category[S] Function unknown 
COG ID[COG3686] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACAT TACTGACTTG TTTGTTTATC GCTATGTTAT TGCCGTATTT GGCCAAAGGG 
CCCGTCGCAT GGGCAATGGC CAAAGCGGGC GGTTATGATA ATCATCACCC GCGTACTCAA
CAGGCGCAAT TAACCGGATT TGGTGCGCGG GCACTCGCTG GGCATCAAAA CGCCTTCGAA
TCTCTACTGA TTTTTGGCTT AGCCGTAGTG ACAGTTATCG CCACGGGCAA ATTCACCGCG
ACTGCAGAGT GGTTAGCGGT TGTGCATATC GTTGCGCGGG TGGCGTATCA GATCTTGTAT
CTGCTGAACA AAGGCACGTT ACGTTCATTG TCTTGGTTTG TGGCGATTTT CAGCGCCTTT
GGTGTCTTCT TCCAAGCGTT TTAA
 
Protein sequence
MHTLLTCLFI AMLLPYLAKG PVAWAMAKAG GYDNHHPRTQ QAQLTGFGAR ALAGHQNAFE 
SLLIFGLAVV TVIATGKFTA TAEWLAVVHI VARVAYQILY LLNKGTLRSL SWFVAIFSAF
GVFFQAF