| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3157 |
|---|
| Symbol | |
|---|
| ID | 4254826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 3734746 |
|---|
| End bp | 3735945 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638123841 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_739198 |
|---|
| Protein GI | 114048648 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACATA TCAAACCTAT TCTCAGCAGT TTATTACGCA GTAAAAGTGG CCCCTTGTTG
CTGTTATTAC AGATCATTTT ATCTGTGGCT ATCGTCGCTA ATGCCAGCTT TATTATCGCC
GAGCGCCTGA ATTTAATGGC GCGGGATTCG GGGATTGTTG AAAGCGAAGT CTTCGATTTC
AGTATTTATC ATTTTGATAA ATCAACGGAT TTAGTTGCGC AGGATAAACG AGATTTAGAG
ATCATCCGTG CGATCCCGGG CGTTATCGAT GTGGCACCCA CCTCTATGGC TCCCCTGAGC
GGTGGCGGTT GGTCGAGTAA CTTTACGCTG GGGCCAGAGG AGCGCGCTAA ATCTACGCCC
AATACGGGCA TGTATATGAG TGATGAGCAT TTCATCAACT CCCTAGGACT GAAGTTAGTC
GAAGGACGCA ACTTCTATCC TCAGGAGATC ACCACAGAGT TGCTTGAAGA TGGTGGCAAG
ATGATCGTCA CCAAAGCCTT TGCCGATAAG GTATGGCCAA ATGAGACTGC GCTCGGCAAG
AGCGTATATA TGGGCACGCA GCACTTTGTG GTGATTGGTG TGCTGGAGCG CTTACAAACG
GCGTGGGTAG ATAACAAAAA CCTGGAGTTT AGCTCAGTGT TGTCGGTGAA TTATCCCGCT
GACTATAAAC GCTATTTAGT GAGAGCTAAG TCGAGCGATA TGGCTCGCCT CAAGGAAGTC
ATTCCCGAGC TGCTGCACAA GGAATATCCG AGCCGCGTGG TCGAAGGTTT TACGACCATG
GGAGAGCGCC GTATCGAGGC GTACCGTGAC CATGAGTTAA TGGCAACCGT ACTGACCATG
ATGGTGGTGT TACTGCTGCT GATCACATCC CTTGGGGTGA CAGGCATGGT GATGTTTAAT
ATCCAGCGCC GCACTAAGCA AATTGGCACT CGCCGCGCGT TAGGGGCGAA AAAACGGGAT
ATTATCAGCT ACTTCCTCGT AGAGAACTAT CTGCTCTGCT TGCTCGGCGG TGGCATTGGT
GTGCTGTTAG CGATTCAGCT CGGCCAGCAA TTGATGAGTC TCTATAGCCT GCCGATGCTG
GAGATAATCT ATCCATTGCT GACTGTGGCG GGGCTGTTTG CGGTAACCAC CCTTGCGGTG
TACTTGCCAG CTCGCAAGGC CGCTAAGATT TCTCCTGCGA CAGCCACCCG CAGTGTTTAA
|
|---|
| Protein sequence | MLHIKPILSS LLRSKSGPLL LLLQIILSVA IVANASFIIA ERLNLMARDS GIVESEVFDF
SIYHFDKSTD LVAQDKRDLE IIRAIPGVID VAPTSMAPLS GGGWSSNFTL GPEERAKSTP
NTGMYMSDEH FINSLGLKLV EGRNFYPQEI TTELLEDGGK MIVTKAFADK VWPNETALGK
SVYMGTQHFV VIGVLERLQT AWVDNKNLEF SSVLSVNYPA DYKRYLVRAK SSDMARLKEV
IPELLHKEYP SRVVEGFTTM GERRIEAYRD HELMATVLTM MVVLLLLITS LGVTGMVMFN
IQRRTKQIGT RRALGAKKRD IISYFLVENY LLCLLGGGIG VLLAIQLGQQ LMSLYSLPML
EIIYPLLTVA GLFAVTTLAV YLPARKAAKI SPATATRSV
|
|---|
| |