Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3146 |
Symbol | |
ID | 4257100 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3724998 |
End bp | 3725855 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638123830 |
Product | extracellular solute-binding protein |
Protein accession | YP_739187 |
Protein GI | 114048637 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACAGG TTAACCTTGC TTCGGCTTAC GCTAAATTTT GCCATATTCG CTACCCACTA ATGGGGCTAA TCGCCCTATT TCATCCCCTT ACAAGCAAAG CTGATGAACT CAAAATAGGG GTCAGTGTGT CAATCCCTCC CTATGTGATT CAAGAGACCA ATAGTGGCTT AGAGCTTGAA TTACTCTACA AAGCCCTCGC CGTTAAGGGG CACAGTGCCA GTATCCATTA TTTCCCCTTG GCGCGTACCT TTCATGAGCT TCGAAAGGGC AATCTCGACG GCATTATCAA CATCAAAGAA GGCATGGTGG ATAACGTATT CTACTCCGAC GTCGCTATCC GCTATCAAAA CTGCGCCATC AGCCTCGATG AACATAAGTT CGCTATCAAC AGTGTCCAGG ACCTCGCCAA TAAAAAGGTC GTCGCCTTCC AACGGGCCTC AGTGTTGCTC GGCGAGGAAT TTAGCCTTAT GGCAAAAGCC AACAGCGGTT ATCAAGAACA GGCGAGGCAA ATACAACAAG TCTATATGTT GATGAAGCAC AGGGCCGATG TGGTAGTAAT GGATAAGAAT ATTTTTAAAT ACTATCTCAA GCAGGCATTT ATCGAGGGGA AATTGACCGA GGCGGAAATC AAGCAAGTGG CTATTTGCAA TCGCATTTTT CCGCCAACGG AATATAAATT TGCCTTTTTA AATGAACAAA TTCGGGATGA CTTTAATCTG GGATTGAAGC AGATCACCGA GGATGGGACC ATCAACGCGC TACAGGAAAA ATATCGACGT TTCGTGTCCC TCGACAACGA TGCCGAGGCC TCAAATACCC TGCTCGACCA CACAGTGTTA AAGCATGATC CGCTCTAG
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Protein sequence | MRQVNLASAY AKFCHIRYPL MGLIALFHPL TSKADELKIG VSVSIPPYVI QETNSGLELE LLYKALAVKG HSASIHYFPL ARTFHELRKG NLDGIINIKE GMVDNVFYSD VAIRYQNCAI SLDEHKFAIN SVQDLANKKV VAFQRASVLL GEEFSLMAKA NSGYQEQARQ IQQVYMLMKH RADVVVMDKN IFKYYLKQAF IEGKLTEAEI KQVAICNRIF PPTEYKFAFL NEQIRDDFNL GLKQITEDGT INALQEKYRR FVSLDNDAEA SNTLLDHTVL KHDPL
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