Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_3100 |
Symbol | |
ID | 4256445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3676694 |
End bp | 3678181 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638123784 |
Product | ATPase central domain-containing protein |
Protein accession | YP_739141 |
Protein GI | 114048591 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.316847 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACA TTCGTGATTT AACCGCCGTA CTACGCTCTA AAACGCCTAT CGTAGTGATT GAAACCTATG AGGAATACCG TGTTGTAGAC ATGCTTAAGC GGGTGGCGAA TGTGCTCTAT CAGCCCTTAT TTACTTGGAG CATTACTCAA GGGCTGACGC GGGTCGATAA ACCCATGGCA GCGCAGAAAT TTAATACTGA ACCTGGCGAT ATCTTAGGGC AGATTAAATC GACGACCCAG CAGGGCATCT ATGTGCTCTG TGATTTTCAT CCCTTTGTGG TTGATGCGCC AAAGAATGTC CGTTTGCTTA AAGAAATCGC CCTCGAATAC GATGTGCTGC AACATACGTT GGTACTAGTG AGCCATGCCT TTGAGATCCC GCCCGAAATT AAGCGTTATT GCGCCTATTT TCAGCTCACC CTGCCGAGCA CCTCGCAGCT TGAGAACTTG ATTTATTTAG AGGTGGATAA AGTGCGCGGC CAAGGCATGC CGCTTACAGT GGATGATAAA GCCGTGGTTA AACTGGCGGA AAACCTGCGC GGTGTAACCT TAGATGATGC CAGACGATTG ATCCATAAGG CGATTGTGGA TGATGGCGCC ATTACCCACT CGGATGTGGA CCTTATCAAT AAAGCCAAAT TCCAATTACT CGATCTTAAC GGTGTGCTGC AATTTGAATA CGACACCAGT GATTTTTCCC AGATTGCCGG ATTACATAAT CTCAAAAAAT GGTTAAAGCA GCGCACGCCC GCGGTGCAGG CATCTACTGA TGCCAAGGCT ACTGTACAAC CCGATGCGCC CAAGGGGGTG TTATTACTCG GAGTGCAGGG CAGCGGTAAG AGCCTTGCGG CCAAGGCGGT AGCGGGCGTA TGGCAACGGC CTTTGCTCAG ACTCGATATG GGCGCCTTAT ATAACAAATA CATAGGCGAA ACCGAAAAGA ACCTGCGTAA TGCTCTCGAG CTGGCCGATA TGATGTCTCC CTGTATCCTT TGGATTGATG AAATAGAGAA AGGCTTAAGC GGCAGTAGCA GTGATGAGGG CACTTCGACC CGCATTCTTG GCACACTGTT AACTTGGATG GCAGAGCGTA AGTCCGAGGT CTTTGTGGTC GCCACCGCTA ACGATATTCA AGCTCTGCCG CCTGAGCTGA TGCGTAAGGG GCGAATGGAT GAAATCTTCT TTGTCGATTT ACCCGACGAG GCCATACGTC AGGCGATTTT CCTGATCCAT TGCCAGCGCC GTGGTATTGA TGTGACTCGG CTCGACCTTG CGCAGTTATC GCGCCACAGC CAAGGGTTTT CGGGAGCTGA AATCGAGCAA GCCGTTATCG CCGCCATGTA CAGCGCCCGC AGTTTAGCGC GAACGCTCGA CCAAGACATG TTGTTAGAAG AGCTGACCAA AACTAAACCT TTATCCATAG TGATGGGCGA TAAGATTAAT GCCCTAAGAC AATGGGCCGC GGGGCGCACA GTCAATGCCC ATGAGTAG
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Protein sequence | MQDIRDLTAV LRSKTPIVVI ETYEEYRVVD MLKRVANVLY QPLFTWSITQ GLTRVDKPMA AQKFNTEPGD ILGQIKSTTQ QGIYVLCDFH PFVVDAPKNV RLLKEIALEY DVLQHTLVLV SHAFEIPPEI KRYCAYFQLT LPSTSQLENL IYLEVDKVRG QGMPLTVDDK AVVKLAENLR GVTLDDARRL IHKAIVDDGA ITHSDVDLIN KAKFQLLDLN GVLQFEYDTS DFSQIAGLHN LKKWLKQRTP AVQASTDAKA TVQPDAPKGV LLLGVQGSGK SLAAKAVAGV WQRPLLRLDM GALYNKYIGE TEKNLRNALE LADMMSPCIL WIDEIEKGLS GSSSDEGTST RILGTLLTWM AERKSEVFVV ATANDIQALP PELMRKGRMD EIFFVDLPDE AIRQAIFLIH CQRRGIDVTR LDLAQLSRHS QGFSGAEIEQ AVIAAMYSAR SLARTLDQDM LLEELTKTKP LSIVMGDKIN ALRQWAAGRT VNAHE
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