| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3078 |
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| Symbol | |
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| ID | 4255913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3657401 |
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| End bp | 3658126 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638123762 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_739119 |
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| Protein GI | 114048569 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0152798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.772446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCAA AACGCGGTCG TCTCGATAGA TACCTTGCCG TTAAGCTACA AATTCACCGT
AAAGCCGTGC GAGAACTCTT GTTGGCGGAG CGAGTGTATG TGGATGGCGC GCCTGCGAAA
GCGCTCGATC TGCTGGTGGA TGAATTTTCC CACATAGTGT TTGATGGACA AGTCTTACAG
GCCAACCAGC CTGTGTATCT TATGCTGTAT AAGCCCGTTG GCGTGGTGAG TGCAACCAAA
GACAAAGAGC ATCGCACTGT CATTGATTTG CTCGATTGCG ATACTCGCCA AGAGCTGCAT
ATTGCGGGTC GGTTAGATTT AAACTCTTCG GGCTTATTGC TGCTGACCAA TGATAGCCGT
TGGTCCGAGG CGCTCATGTC GCCAGAGCAA AAAGTGGATA AAGTGTATCG GGTGACTCTG
GCAAATCCTT TGAGCGATGA GTATATCGCG GCATTTGCAC AGGGCATGTA TTTTGGCTTT
GAAGATATCA CTACTCAGCC GGCAAAGCTT GTTATCCTCG CCCCTCACGT TGCAGAGGTG
ACCTTAAGGG AAGGTAAATA CCATCAAATC AAGCGGATGT TTGGCCGTTT TCGTAACCCT
GTGCTGGGAT TACACCGACT TTCTATCGGT GAGATTACCC TAGATGAAGC CTTAAAACCG
GGCGAGAGTC GTATGTTGAC GGCGCAGGAG GTCGCATCTA TCTATCTTAC GACGAAGCCT
GATTAG
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| Protein sequence | MQSKRGRLDR YLAVKLQIHR KAVRELLLAE RVYVDGAPAK ALDLLVDEFS HIVFDGQVLQ
ANQPVYLMLY KPVGVVSATK DKEHRTVIDL LDCDTRQELH IAGRLDLNSS GLLLLTNDSR
WSEALMSPEQ KVDKVYRVTL ANPLSDEYIA AFAQGMYFGF EDITTQPAKL VILAPHVAEV
TLREGKYHQI KRMFGRFRNP VLGLHRLSIG EITLDEALKP GESRMLTAQE VASIYLTTKP
D
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